RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PDIA2Q13087 525 aaKnown RBP18.73■□□□□ 0.59
CAPN1-201ENST00000279247 KIAA0319Q5VV43 1072 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 PYROXD2Q8N2H3 581 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 TNIP3Q96KP6 325 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 PPP1R10Q96QC0 940 aaKnown RBP18.73■□□□□ 0.59
CAPN1-201ENST00000279247 RSAD1Q9HA92 442 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 MYO18AQ92614 2054 aaKnown RBP18.73■□□□□ 0.59
CAPN1-201ENST00000279247 RPL22P35268 128 aaKnown RBP18.73■□□□□ 0.59
CAPN1-201ENST00000279247 PCK1P35558 622 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 NME3Q13232 169 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 AGMOQ6ZNB7 445 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 NKD2Q969F2 451 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-201ENST00000279247 KCNK16Q96T55 309 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 GDAP2Q9NXN4 497 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 CALCOCO1Q9P1Z2 691 aa18.73■□□□□ 0.59
CAPN1-201ENST00000279247 ITGAVP06756 1048 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 PTPN1P18031 435 aaKnown RBP18.72■□□□□ 0.59
CAPN1-201ENST00000279247 IFRD2Q12894 506 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-201ENST00000279247 C6orf118Q5T5N4 469 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 ANKRD42Q8N9B4 389 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 BBOF1Q8ND07 529 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-201ENST00000279247 KCNK9Q9NPC2 374 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 KRT82Q9NSB4 513 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 CWC15Q9P013 229 aaKnown RBP18.72■□□□□ 0.59
CAPN1-201ENST00000279247 SLC12A6Q9UHW9 1150 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 MYBPHLA2RUH7 354 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 F8W810 466 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 APOC4-APOC2K7ER74 178 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 B3GAT3O94766 335 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 APOC2P02655 101 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 CHN1P15882 459 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 GSCP56915 257 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-201ENST00000279247 SERINC5Q86VE9 423 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 DEFB106AQ8N104 65 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 CCDC185Q8N715 623 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 TBCBQ99426 244 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 LRRC4Q9HBW1 653 aa18.72■□□□□ 0.59
CAPN1-201ENST00000279247 ADAMTS4O75173 837 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 IGHA2P01877 340 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 IVLP07476 585 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 HOXC8P31273 242 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 BRCC3P46736 316 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 BCAR1P56945 870 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 CAV1Q03135 178 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 ARHGAP17Q68EM7 881 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 CRYBG2Q8N1P7 616 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 ADAM2Q99965 735 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 SCN10AQ9Y5Y9 1956 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 ROR1Q01973 937 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 IRF5Q13568 498 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 BBS9Q3SYG4 887 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 CYP4X1Q8N118 509 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 TTC13Q8NBP0 860 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 ARHGEF2Q92974 986 aaKnown RBP18.71■□□□□ 0.59
CAPN1-201ENST00000279247 TLCD1Q96CP7 247 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 PCDH9Q9HC56 1237 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 PCDH18Q9HCL0 1135 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 DRG1Q9Y295 367 aaKnown RBP18.71■□□□□ 0.59
CAPN1-201ENST00000279247 MFHAS1Q9Y4C4 1052 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 KCNN4O15554 427 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 DESP17661 470 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 SLC8A3P57103 927 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 TMED2Q15363 201 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 XKR4Q5GH76 650 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 SPDYCQ5MJ68 293 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 RNASEH2BQ5TBB1 312 aaKnown RBP18.71■□□□□ 0.59
CAPN1-201ENST00000279247 HFE2Q6ZVN8 426 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 MAP7D3Q8IWC1 876 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 SIX6OS1Q8N1H7 587 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 ZCCHC9Q8N567 271 aaKnown RBP18.71■□□□□ 0.59
CAPN1-201ENST00000279247 RAET1EQ8TD07 263 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 RNF157Q96PX1 679 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 PCDH10Q9P2E7 1040 aa18.71■□□□□ 0.59
CAPN1-201ENST00000279247 PTPN7P35236 360 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 ACAP1Q15027 740 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 DRICH1Q6PGQ1 229 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-201ENST00000279247 PCDH19Q8TAB3 1148 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 ZNF296Q8WUU4 475 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-201ENST00000279247 SETSIPP0DME0 302 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 IL4RP24394 825 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 SULT1E1P49888 294 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 ANKRD20A8PQ5CZ79 823 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 SRRM1Q8IYB3 904 aaKnown RBP18.7■□□□□ 0.58
CAPN1-201ENST00000279247 PGM2Q96G03 612 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 CRTAC1Q9NQ79 661 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 RALGAPA2Q2PPJ7 1873 aa18.7■□□□□ 0.58
CAPN1-201ENST00000279247 EXOC1LA0A1B0GW35 172 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 KPNA6O60684 536 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 CACNA2D1P54289 1103 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 MSS51Q4VC12 460 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 BOLA3Q53S33 107 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 PAQR9Q6ZVX9 377 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 HACE1Q8IYU2 909 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 PLD5Q8N7P1 536 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 CPT1BQ92523 772 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 CCT8L2Q96SF2 557 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 EPN3Q9H201 632 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 AP4E1Q9UPM8 1137 aa18.69■□□□□ 0.58
CAPN1-201ENST00000279247 MRPL42Q9Y6G3 142 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms