RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CALML6Q8TD86 181 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 IGDCC4Q8TDY8 1250 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 UTP15Q8TED0 518 aaKnown RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 RIN2Q8WYP3 895 aaPredicted RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 ST8SIA4Q92187 359 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 RILPL2Q969X0 211 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 KIF1BPQ96EK5 621 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 LCORQ96JN0 433 aaPredicted RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 ZSWIM3Q96MP5 696 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 HEPHQ9BQS7 1158 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 POLR3CQ9BUI4 534 aaPredicted RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 KCNH7Q9NS40 1196 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 FBXL5Q9UKA1 691 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ARHGAP26Q9UNA1 814 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 EPN1Q9Y6I3 576 aaPredicted RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 SBF2Q86WG5 1849 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 KIF20BQ96Q89 1820 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 A0A0B4J269 797 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 LRRC14BA6NHZ5 514 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 F8W8V4 182 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 ELL2O00472 640 aaPredicted RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 KCNK3O14649 394 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 HNRNPDLO14979 420 aaKnown RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 FAM155BO75949 473 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 CCDC175P0C221 793 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 ENPP1P22413 925 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 PPP2R1AP30153 589 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 HSPA4P34932 840 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 RFC4P35249 363 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 MCM2P49736 904 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 CCR5P51681 352 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 UBE3AQ05086 875 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 DBPQ10586 325 aaPredicted RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 SNAPC2Q13487 334 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 UBE3CQ15386 1083 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 FSCN1Q16658 493 aaKnown RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 ATP2B3Q16720 1220 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 MUM1L1Q5H9M0 696 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 FAM26FQ5R3K3 315 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 NT5DC1Q5TFE4 455 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 CD276Q5ZPR3 534 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 MCTP2Q6DN12 878 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 RAB12Q6IQ22 244 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 KDELC1Q6UW63 502 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 LCNL1Q6ZST4 164 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 PLEKHH3Q7Z736 793 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 C2CD5Q86YS7 1000 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 CILP2Q8IUL8 1156 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 CEP97Q8IW35 865 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 IQCF2Q8IXL9 164 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 RNF168Q8IYW5 571 aaPredicted RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 TBC1D21Q8IYX1 336 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 BICD2Q8TD16 824 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 ADAMTS17Q8TE56 1095 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 ANKS1AQ92625 1134 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 PTPN18Q99952 460 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 SPATA25Q9BR10 227 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 MXD3Q9BW11 206 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 PNNQ9H307 717 aaKnown RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 PRDM13Q9H4Q3 707 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 EPS8L2Q9H6S3 715 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 ZNF287Q9HBT7 754 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 FANCFQ9NPI8 374 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 ACSS2Q9NR19 701 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 USP36Q9P275 1121 aaKnown RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 DKK3Q9UBP4 350 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 SRP68Q9UHB9 627 aaKnown RBP4.96□□□□□ -1.62
CD44-202ENST00000278385 FEM1BQ9UK73 627 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 PCDHGB4Q9UN71 923 aa4.96□□□□□ -1.62
CD44-202ENST00000278385 PAPPAQ13219 1627 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 A0A1B0GTL3 188 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 LCHNA4D1U4 455 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MROH6A6NGR9 719 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 NT5C1B-RDH14C9J2C7 533 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 H0Y858 1186 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 UBE2CO00762 179 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 CAPN9O14815 690 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MUSKO15146 869 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 FOXP2O15409 715 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 ERAL1O75616 437 aaKnown RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 BBOX1O75936 387 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 USP1O94782 785 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 PGM3O95394 542 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MLYCDO95822 493 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 SCGB1D1O95968 90 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 AMY2AP04746 511 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 QDPRP09417 244 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 INHBBP09529 407 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 SLC9A1P19634 815 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 AMY2BP19961 511 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 PTGS1P23219 599 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 MAPK4P31152 587 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 SLC16A1P53985 500 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 SH3BGRP55822 239 aaPredicted RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 NLRP5P59047 1200 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 POLR2FP61218 127 aaKnown RBP4.95□□□□□ -1.62
CD44-202ENST00000278385 RBP5P82980 135 aa4.95□□□□□ -1.62
CD44-202ENST00000278385 FMO1Q01740 532 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms