RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CDK7P50613 346 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 ADCY1Q08828 1119 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 C3orf62Q6ZUJ4 267 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 C4orf33Q8N1A6 199 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 KIF2BQ8N4N8 673 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 C10orf82Q8WW14 230 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 ZNF75CPQ92670 426 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-201ENST00000277198 STAMBPL1Q96FJ0 436 aa13.48□□□□□ -0.25
C9orf3-201ENST00000277198 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
C9orf3-201ENST00000277198 FRMD8Q9BZ67 464 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-201ENST00000277198 FAM155BO75949 473 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 IL18RAPO95256 599 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PRKCBP05771 671 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 TROVE2P10155 538 aaKnown RBP eCLIP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PURAQ00577 322 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 SLC1A5Q15758 541 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PTPN20Q4JDL3 420 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 SEZ6Q53EL9 994 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 LVRNQ6Q4G3 990 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 MPZL3Q6UWV2 235 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 BADQ92934 168 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 MAK16Q9BXY0 300 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 BCO2Q9BYV7 579 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PTPRHQ9HD43 1115 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 Q9Y3F1 56 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 ARVCFO00192 962 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 ACKR2O00590 384 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 KIF1CO43896 1103 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 CLTBP09497 229 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 RPL22P35268 128 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PCK1P35558 622 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 GABRB2P47870 512 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PSMC1P62191 440 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
C9orf3-201ENST00000277198 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 ANKRD33Q7Z3H0 272 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PALM2Q8IXS6 379 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 FAM126BQ8IXS8 530 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 CYTH2Q99418 400 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 PAFAH2Q99487 392 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 KIF9Q9HAQ2 790 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 SLCO1B3Q9NPD5 702 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 LNPEPQ9UIQ6 1025 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 STK38LQ9Y2H1 464 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 L3MBTL1Q9Y468 752 aa13.47□□□□□ -0.25
C9orf3-201ENST00000277198 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 A0A1W2PPM1 405 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 SOX1O00570 391 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-201ENST00000277198 MCF2LO15068 1137 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 RNF8O76064 485 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 TGDSO95455 350 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 IL1BP01584 269 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 TCF7P36402 384 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-201ENST00000277198 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 TFDP1Q14186 410 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 CYP4A22Q5TCH4 519 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 DENND1BQ6P3S1 775 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 OTOAQ7RTW8 1153 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 PLPPR4Q7Z2D5 763 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 BANPQ8N9N5 519 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 MIS12Q9H081 205 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 FZD8Q9H461 694 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
C9orf3-201ENST00000277198 A6NJR5 290 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 LGR5O75473 907 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ENDOD1O94919 500 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 MMP3P08254 477 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 IL1R2P27930 398 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ATICP31939 592 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 SLC26A2P50443 739 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 WASHC2DQ5SRD0 308 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 FNBP1LQ5T0N5 605 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 CHSY1Q86X52 802 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 XYLT1Q86Y38 959 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF276Q8N554 614 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 SLC4A11Q8NBS3 891 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 RNF149Q8NC42 400 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 KCTD6Q8NC69 237 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 FBXO36Q8NEA4 188 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 APBB2Q92870 758 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 MCRS1Q96EZ8 462 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 UBE2OQ9C0C9 1292 aaKnown RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TLE6Q9H808 572 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms