RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 PTPN13Q12923 2485 aa13.12□□□□□ -0.31
MRPS28-201ENST00000276585 ADAMTS9Q9P2N4 1935 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 PDXKO00764 312 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 EXOC3O60645 756 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 ATP2C2O75185 946 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 TADA3O75528 432 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 ALDH1A2O94788 518 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 VNN1O95497 513 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 STAU1O95793 577 aaKnown RBP13.11□□□□□ -0.31
MRPS28-201ENST00000276585 NR3C1P04150 777 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 SYPP08247 313 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 SERPINF2P08697 491 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 ARSAP15289 507 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 TNNI1P19237 187 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
MRPS28-201ENST00000276585 LMO2P25791 158 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 HOXD12P35452 270 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 DLG4P78352 724 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 TSPY1Q01534 308 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 SRSF1Q07955 248 aaKnown RBP eCLIP13.11□□□□□ -0.31
MRPS28-201ENST00000276585 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 KCNB1Q14721 858 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 ZCWPW2Q504Y3 356 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 FAM171BQ6P995 826 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 LRRC69Q6ZNQ3 347 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 TMPRSS7Q7RTY8 843 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 DCP1BQ8IZD4 617 aaKnown RBP13.11□□□□□ -0.31
MRPS28-201ENST00000276585 GOLGA5Q8TBA6 731 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 ARID3AQ99856 593 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 FAM83CQ9BQN1 747 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
MRPS28-201ENST00000276585 PI4K2AQ9BTU6 479 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 CRTAC1Q9NQ79 661 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 DNAAF2Q9NVR5 837 aaKnown RBP13.11□□□□□ -0.31
MRPS28-201ENST00000276585 GTF3C4Q9UKN8 822 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 PCDHB5Q9Y5E4 795 aa13.11□□□□□ -0.31
MRPS28-201ENST00000276585 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
MRPS28-201ENST00000276585 FGF19O95750 216 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 CYP2F1P24903 491 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 P2RY2P41231 377 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 LHX1P48742 406 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 TUFMP49411 452 aaKnown RBP13.1□□□□□ -0.31
MRPS28-201ENST00000276585 MYL6P60660 151 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
MRPS28-201ENST00000276585 NUCB2P80303 420 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 CYP4F8P98187 520 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 MYL7Q01449 175 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 SLC14A1Q13336 389 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 NFE2Q16621 373 aaPredicted RBP13.1□□□□□ -0.31
MRPS28-201ENST00000276585 CFAP221Q4G0U5 840 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 SDHAF4Q5VUM1 108 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 FRMD1Q8N878 549 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 CD101Q93033 1021 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 CAPN10Q9HC96 672 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 ABCB6Q9NP58 842 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
MRPS28-201ENST00000276585 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 KIAA1549LQ6ZVL6 1849 aa13.1□□□□□ -0.31
MRPS28-201ENST00000276585 TACC1O75410 805 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 PCSK1P29120 753 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 GJA4P35212 333 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 SEC13P55735 322 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 PNOCQ13519 176 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 NFIL3Q16649 462 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 TAF1BQ53T94 588 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 C2orf27AQ580R0 203 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 PEAR1Q5VY43 1037 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 RABEPKQ7Z6M1 372 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 ITIH5Q86UX2 942 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 FAM181AQ8N9Y4 354 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 OLIG1Q8TAK6 271 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 EZH1Q92800 747 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 MYLPFQ96A32 169 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 GCNAQ96QF7 691 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 SDCBP2Q9H190 292 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 DPEP3Q9H4B8 488 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 SMYD3Q9H7B4 428 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 VRTNQ9H8Y1 702 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 TMEM30AQ9NV96 361 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 MAPK8IP1Q9UQF2 711 aa13.09□□□□□ -0.31
MRPS28-201ENST00000276585 GOLGA4Q13439 2230 aaKnown RBP13.09□□□□□ -0.31
MRPS28-201ENST00000276585 TEX51A0A1B0GUA7 166 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 NOL4O94818 638 aa13.08□□□□□ -0.32
MRPS28-201ENST00000276585 F11P03951 625 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms