RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CUL2Q13617 745 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 LPAL2Q16609 132 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 HEATR6Q6AI08 1181 aaKnown RBP15.24■□□□□ 0.03
HMGN3-201ENST00000275036 LMO3Q8TAP4 145 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 ATP2A3Q93084 1043 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 WBP2Q969T9 261 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 TMEM176AQ96HP8 235 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 HEXIM2Q96MH2 286 aaKnown RBP15.24■□□□□ 0.03
HMGN3-201ENST00000275036 P2RY13Q9BPV8 354 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 DUSP16Q9BY84 665 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 OSER1Q9NX31 292 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 SPAG17Q6Q759 2223 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 SDK1Q7Z5N4 2213 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 PMM2O15305 246 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 CYP26A1O43174 497 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 CYP17A1P05093 508 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TRIM21P19474 475 aaKnown RBP15.23■□□□□ 0.03
HMGN3-201ENST00000275036 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TGM1P22735 817 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TUBP50607 506 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 NRLP54845 237 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TRIM59Q8IWR1 403 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TTC39CQ8N584 583 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TRIML1Q8N9V2 468 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 CD101Q93033 1021 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 SRRTQ9BXP5 876 aaKnown RBP15.23■□□□□ 0.03
HMGN3-201ENST00000275036 FBXO44Q9H4M3 255 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 NMUR1Q9HB89 426 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 PNPLA8Q9NP80 782 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 PARD6AQ9NPB6 346 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 CFAP97Q9P2B7 532 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 SCML2Q9UQR0 700 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 CEP250Q9BV73 2442 aa15.23■□□□□ 0.03
HMGN3-201ENST00000275036 TBX18O95935 607 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-201ENST00000275036 KIF11P52732 1056 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
HMGN3-201ENST00000275036 ARHGAP17Q68EM7 881 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 KAT5Q92993 513 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 RMDN1Q96DB5 314 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 FAM124BQ9H5Z6 455 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-201ENST00000275036 NCDNQ9UBB6 729 aa15.22■□□□□ 0.03
HMGN3-201ENST00000275036 A0A1W2PQH9 124 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 TULP2O00295 520 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 TLR5O60602 858 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 NFATC1O95644 943 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 DRD1P21728 446 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 HOXA6P31267 233 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 SCD5Q86SK9 330 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 KIAA1958Q8N8K9 716 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 RPLP0P6Q8NHW5 317 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 CLSTN2Q9H4D0 955 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 CYLDQ9NQC7 956 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 TLR8Q9NR97 1041 aaKnown RBP15.21■□□□□ 0.03
HMGN3-201ENST00000275036 USP3Q9Y6I4 520 aa15.21■□□□□ 0.03
HMGN3-201ENST00000275036 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 K7EQS6 105 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 RNF225M0QZC1 329 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-201ENST00000275036 MDM4O15151 490 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 GREM1O60565 184 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 TBXAS1P24557 533 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-201ENST00000275036 ID4P47928 161 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 SLC6A11P48066 632 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 AMPD2Q01433 879 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 DHCR24Q15392 516 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 RHBDF2Q6PJF5 856 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 PRR23BQ6ZRT6 265 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 PIGZQ86VD9 579 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 WDR5BQ86VZ2 330 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
HMGN3-201ENST00000275036 ARHGEF19Q8IW93 802 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 NT5C1BQ96P26 610 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-201ENST00000275036 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
HMGN3-201ENST00000275036 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 NUDT5Q9UKK9 219 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 TSPAN16Q9UKR8 245 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 RALGAPA1Q6GYQ0 2036 aa15.2■□□□□ 0.02
HMGN3-201ENST00000275036 E2F8A0AVK6 867 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 P4HA2O15460 535 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 GNA14O95837 355 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 CALCAP01258 141 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
HMGN3-201ENST00000275036 IRF1P10914 325 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 RARGP13631 454 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 NR1H3Q13133 447 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 SIM2Q14190 667 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms