RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 DNAJC14Q6Y2X3 702 aaPredicted RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 ACTL9Q8TC94 416 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 MCEEQ96PE7 176 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 SLC17A6Q9P2U8 582 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 ZNF536O15090 1300 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 CAPN14A8MX76 684 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 CXorf49A8MYA2 514 aaPredicted RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 SERPINB5P36952 375 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 EMP3P54852 163 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 DACT2Q5SW24 774 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 HHIPL2Q6UWX4 724 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 LENG9Q96B70 501 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 APOPT1Q96IL0 206 aa13.32□□□□□ -0.28
HERC6-202ENST00000273960 GNEQ9Y223 722 aaKnown RBP13.32□□□□□ -0.28
HERC6-202ENST00000273960 ROBO3Q96MS0 1386 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 TCRBV9S1A1TA0A576 114 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 ZC3H11AO75152 810 aaKnown RBP eCLIP13.31□□□□□ -0.28
HERC6-202ENST00000273960 STIP1P31948 543 aaKnown RBP13.31□□□□□ -0.28
HERC6-202ENST00000273960 HDAC4P56524 1084 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 MYBPC1Q00872 1141 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 OTUD4Q01804 1114 aaKnown RBP13.31□□□□□ -0.28
HERC6-202ENST00000273960 STX3Q13277 289 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 CYP4A22Q5TCH4 519 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 BSPRYQ5W0U4 402 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 OGFOD2Q6N063 350 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 PADI6Q6TGC4 694 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 TMEM110Q86TL2 294 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 IFNLR1Q8IU57 520 aaPredicted RBP13.31□□□□□ -0.28
HERC6-202ENST00000273960 LRRC43Q8N309 656 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 CPT1BQ92523 772 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 LXNQ9BS40 222 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 PNPOQ9NVS9 261 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 DNAJA2O60884 412 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 NFKBIAP25963 317 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 SLC5A3P53794 718 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 DGKZQ13574 1117 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 NIM1KQ8IY84 436 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 ALLCQ8N6M5 410 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 ATXN7L3BQ96GX2 97 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 STRIP2Q9ULQ0 834 aa13.31□□□□□ -0.28
HERC6-202ENST00000273960 APOBEC2Q9Y235 224 aaKnown RBP13.31□□□□□ -0.28
HERC6-202ENST00000273960 ARHGAP10A1A4S6 786 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 CST8O60676 142 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 DPEP1P16444 411 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 CDKL1Q00532 357 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 MORF4L2Q15014 288 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 KLHL38Q2WGJ6 581 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 FAM102BQ5T8I3 360 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 SH3BP5LQ7L8J4 393 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 TDRPQ86YL5 185 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 UNC45BQ8IWX7 931 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 HACE1Q8IYU2 909 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 SHC3Q92529 594 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 CROCCQ5TZA2 2017 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 DOCK2Q92608 1830 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 LIN9Q5TKA1 542 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 XKR5Q6UX68 686 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 TTC13Q8NBP0 860 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 CALN1Q9BXU9 219 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 ACSS3Q9H6R3 686 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 DMAC2Q9NW81 257 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 PCDHB4Q9Y5E5 795 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 GMEB1Q9Y692 573 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 LRP5O75197 1615 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 STX16-NPEPL1H3BU86 382 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 J3QRK9 145 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 EIF3DO15371 548 aaKnown RBP eCLIP13.3□□□□□ -0.28
HERC6-202ENST00000273960 ATP9BO43861 1147 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 TNNI1P19237 187 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 RPL22P35268 128 aaKnown RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 FRMD7Q6ZUT3 714 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 C15orf52Q6ZUT6 534 aaKnown RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 CLVS1Q8IUQ0 354 aaPredicted RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 SLC7A5P1Q8MH63 180 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
HERC6-202ENST00000273960 FBXL8Q96CD0 374 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 MARK4Q96L34 752 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 ZDHHC15Q96MV8 337 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 TRNAU1APQ9NX07 287 aaKnown RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 KCNK4Q9NYG8 393 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 VAV3Q9UKW4 847 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
HERC6-202ENST00000273960 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
HERC6-202ENST00000273960 RGL2O15211 777 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
HERC6-202ENST00000273960 JAG1P78504 1218 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 GABPAQ06546 454 aa13.29□□□□□ -0.28
HERC6-202ENST00000273960 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms