RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SLC6A16Q9GZN6 736 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 UPF2Q9HAU5 1272 aaKnown RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 CD248Q9HCU0 757 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 VPS45Q9NRW7 570 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 IL37Q9NZH6 218 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 TRPM5Q9NZQ8 1165 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 HMGXB4Q9UGU5 601 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 MBD1Q9UIS9 605 aaPredicted RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 MMP17Q9ULZ9 603 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 GON4LQ3T8J9 2241 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CELSR3Q9NYQ7 3312 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 MYO18AQ92614 2054 aaKnown RBP9.52□□□□□ -0.88
TPM3-201ENST00000271850 ASCC3Q8N3C0 2202 aaKnown RBP9.52□□□□□ -0.88
TPM3-201ENST00000271850 THADAQ6YHU6 1953 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 FREM2Q5SZK8 3169 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 A0A0A0MRY4 1105 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 FAM92AA1XBS5 289 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 LRRIQ3A6PVS8 624 aaPredicted RBP9.52□□□□□ -0.89
TPM3-201ENST00000271850 C4orf47A7E2U8 309 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 COCHO43405 550 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 WFS1O76024 890 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 NFATC1O95644 943 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ZDHHC11BP0C7U3 371 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 PFKLP17858 780 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 DLG4P78352 724 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 CLDN10P78369 228 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 AMPD2Q01433 879 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ORC1Q13415 861 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 STK38Q15208 465 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 SURF1Q15526 300 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 IL31Q6EBC2 164 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ANO7Q6IWH7 933 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 FAM35AQ86V20 835 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 C12orf56Q8IXR9 622 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ALLCQ8N6M5 410 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 C12orf50Q8NA57 414 aaPredicted RBP9.52□□□□□ -0.89
TPM3-201ENST00000271850 XXYLT1Q8NBI6 393 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 KIAA0895Q8NCT3 520 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 TSTD1Q8NFU3 115 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 OR6B3Q8NGW1 331 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ACDQ96AP0 544 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 CHAMP1Q96JM3 812 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 EDEM2Q9BV94 578 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 ZSCAN16Q9H4T2 348 aaPredicted RBP9.52□□□□□ -0.89
TPM3-201ENST00000271850 CCSER2Q9H7U1 834 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 SLC39A2Q9NP94 309 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 TMEM74BQ9NUR3 256 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 DMAC2Q9NW81 257 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 CFAP97Q9P2B7 532 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
TPM3-201ENST00000271850 PLXND1Q9Y4D7 1925 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 UBE4BO95155 1302 aa9.52□□□□□ -0.89
TPM3-201ENST00000271850 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.89
TPM3-201ENST00000271850 ZFYVE26Q68DK2 2539 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 A8MXQ7 604 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 POLR2DO15514 142 aaKnown RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 FOXD2O60548 495 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 CUTAO60888 179 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 KAT7O95251 611 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 KLF8O95600 359 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 YEATS4O95619 227 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 CAVIN2O95810 425 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 C4BPAP04003 597 aaKnown RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 FAM163BP0C2L3 166 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 TNNI1P19237 187 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 P2RY2P41231 377 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 PTGER3P43115 390 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 SLC5A3P53794 718 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 KDSRQ06136 332 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 IFRD2Q12894 506 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 STK4Q13043 487 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 MAP7D1Q3KQU3 841 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 FOXD4L6Q3SYB3 417 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 LY6G5CQ5SRR4 150 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 FOXD4L5Q5VV16 416 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 SNX30Q5VWJ9 437 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 PSAPL1Q6NUJ1 521 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 FOXD4L3Q6VB84 417 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 SCARA5Q6ZMJ2 495 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 HS2ST1Q7LGA3 356 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 GPRIN1Q7Z2K8 1008 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 BBS7Q8IWZ6 715 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 FUKQ8N0W3 1084 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 KIAA1958Q8N8K9 716 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 TXNDC5Q8NBS9 432 aaKnown RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 FOXD4L4Q8WXT5 416 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 TWNKQ96RR1 684 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 SMOQ99835 787 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 ELOVL4Q9GZR5 314 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 SNX25Q9H3E2 840 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms