RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RNF19AQ9NV58 838 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 SENP1Q9P0U3 644 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 SNX9Q9Y5X1 595 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 E7ESA3 106 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 EN2P19622 333 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 NCALDP61601 193 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 MGAT5Q09328 741 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 SNCBQ16143 134 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 DCAF4L1Q3SXM0 396 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 CCDC14Q49A88 953 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 ZC3H12AQ5D1E8 599 aaKnown RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PMF1Q6P1K2 205 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 TBC1D1Q86TI0 1168 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 TTC30AQ86WT1 665 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PDIK1LQ8N165 341 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 ZNF333Q96JL9 665 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 ZMAT2Q96NC0 199 aaKnown RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PHACTR1Q9C0D0 580 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PPCSQ9HAB8 311 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 NME7Q9Y5B8 376 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 ENDOD1O94919 500 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 MAP3K6O95382 1288 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 MMP3P08254 477 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 SMPD1P17405 629 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 RANBP2P49792 3224 aaKnown RBP13.44□□□□□ -0.26
CPSF6-201ENST00000266679 ELF3P78545 371 aaPredicted RBP13.44□□□□□ -0.26
CPSF6-201ENST00000266679 TFDP2Q14188 446 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 KLHL38Q2WGJ6 581 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 FAM47CQ5HY64 1035 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 OLFML1Q6UWY5 402 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 GTF3C2Q8WUA4 911 aaPredicted RBP13.44□□□□□ -0.26
CPSF6-201ENST00000266679 FAM172AQ8WUF8 416 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 LRRN4Q8WUT4 740 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 C18orf25Q96B23 403 aaPredicted RBP13.44□□□□□ -0.26
CPSF6-201ENST00000266679 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
CPSF6-201ENST00000266679 MIS12Q9H081 205 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 ACSS3Q9H6R3 686 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 KIAA1257Q9ULG3 409 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 PDCD11Q14690 1871 aaKnown RBP13.44□□□□□ -0.26
CPSF6-201ENST00000266679 HCRTO43612 131 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 TYROBPO43914 113 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 KRT4P19013 534 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 ELK3P41970 407 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 PRKCZQ05513 592 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 CA9Q16790 459 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 GALNTL6Q49A17 601 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 ECHDC2Q86YB7 292 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 NT5DC4Q86YG4 428 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 IGDCC3Q8IVU1 814 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 TTC39CQ8N584 583 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 FITM2Q8N6M3 262 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 FAF2Q96CS3 445 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 SNX27Q96L92 541 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 RNF157Q96PX1 679 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 SLCO1B3Q9NPD5 702 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 SETD4Q9NVD3 440 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 KLHL14Q9P2G3 628 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 PHTF1Q9UMS5 762 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 HES2Q9Y543 173 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 HEY1Q9Y5J3 304 aa13.44□□□□□ -0.26
CPSF6-201ENST00000266679 GOLGA8RI6L899 631 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 DPYSL4O14531 572 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 APOL1O14791 398 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 KCNN4O15554 427 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 SDC4P31431 198 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-201ENST00000266679 MSH2P43246 934 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 GCLCP48506 637 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-201ENST00000266679 YARSP54577 528 aaKnown RBP13.43□□□□□ -0.26
CPSF6-201ENST00000266679 KCNJ11Q14654 390 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 RASA2Q15283 850 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 STILQ15468 1287 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 PDK4Q16654 411 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 FAXCQ5TGI0 409 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 LVRNQ6Q4G3 990 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 CATSPER4Q7RTX7 472 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 ZNF410Q86VK4 478 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 LRRC8CQ8TDW0 803 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 DCAKDQ8WVC6 231 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 GRAMD1AQ96CP6 724 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 KLF6Q99612 283 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-201ENST00000266679 SNRNP25Q9BV90 132 aaKnown RBP13.43□□□□□ -0.26
CPSF6-201ENST00000266679 DPEP3Q9H4B8 488 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 RXFP1Q9HBX9 757 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 GABRQQ9UN88 632 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 KBTBD13C9JR72 458 aa13.43□□□□□ -0.26
CPSF6-201ENST00000266679 GTF2A1P52655 376 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms