RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CFAP97Q9P2B7 532 aa10.31□□□□□ -0.76
VPS41-201ENST00000265745 HMGXB4Q9UGU5 601 aa10.31□□□□□ -0.76
VPS41-201ENST00000265745 USP18Q9UMW8 372 aa10.31□□□□□ -0.76
VPS41-201ENST00000265745 ATP8B3O60423 1300 aa10.31□□□□□ -0.76
VPS41-201ENST00000265745 K7EQS6 105 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 CYP17A1P05093 508 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 TRIM49P0CI25 452 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 TRIM49CP0CI26 452 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 MBL2P11226 248 aaPredicted RBP10.3□□□□□ -0.76
VPS41-201ENST00000265745 CCDC130P13994 396 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 PSMC2P35998 433 aaKnown RBP10.3□□□□□ -0.76
VPS41-201ENST00000265745 PIK3CAP42336 1068 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 GCGRP47871 477 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 GCLMP48507 274 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 TUBP50607 506 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 INCA1Q0VD86 236 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 ORC1Q13415 861 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 DHCR24Q15392 516 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 ZCWPW2Q504Y3 356 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 HECTD3Q5T447 861 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 CEP68Q76N32 757 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 DDX42Q86XP3 938 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS41-201ENST00000265745 FAM186BQ8IYM0 893 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
VPS41-201ENST00000265745 RPLP0P6Q8NHW5 317 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 CCDC26Q8TAB7 109 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 GAB3Q8WWW8 586 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 ZFRQ96KR1 1074 aaKnown RBP10.3□□□□□ -0.76
VPS41-201ENST00000265745 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 HNRNPABQ99729 332 aaKnown RBP10.3□□□□□ -0.76
VPS41-201ENST00000265745 CYP3A43Q9HB55 503 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.3□□□□□ -0.762e-6■■■■■ 95.7
VPS41-201ENST00000265745 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 SEMA4GQ9NTN9 838 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 GMIPQ9P107 970 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 TBC1D14Q9P2M4 693 aa10.3□□□□□ -0.76
VPS41-201ENST00000265745 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 DNAH14Q0VDD8 3507 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 A0A0A0MRY4 1105 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 E2F8A0AVK6 867 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 SCAMP3O14828 347 aaKnown RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 RPP40O75818 363 aaKnown RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 KRT13P13646 458 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 GTF2H1P32780 548 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 SLC6A11P48066 632 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 PGFP49763 221 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 ATXN1P54253 815 aaKnown RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 MAP3K7CLP57077 242 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 DMC1Q14565 340 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 CSRP2Q16527 193 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 EDRF1Q3B7T1 1238 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 CACNA2D4Q7Z3S7 1137 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 FMR1NBQ8N0W7 255 aaPredicted RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 USP33Q8TEY7 942 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 WHAMMQ8TF30 809 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 ACDQ96AP0 544 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 CYFIP2Q96F07 1278 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 EEF2KMTQ96G04 330 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 LOXL4Q96JB6 756 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 HHIPQ96QV1 700 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 TWNKQ96RR1 684 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 DUSP9Q99956 384 aaKnown RBP10.29□□□□□ -0.76
VPS41-201ENST00000265745 NT5C1AQ9BXI3 368 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 IMPG2Q9BZV3 1241 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 FBXO44Q9H4M3 255 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 CCSER2Q9H7U1 834 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 FAM49BQ9NUQ9 324 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 EBF1Q9UH73 591 aa10.29□□□□□ -0.76
VPS41-201ENST00000265745 DMXL1Q9Y485 3027 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 MED19A0JLT2 244 aaPredicted RBP10.28□□□□□ -0.76
VPS41-201ENST00000265745 ANTXRLA6NF34 631 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 HHLA1C9JL84 531 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 AXIN1O15169 862 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 CILPO75339 1184 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 APBB3O95704 486 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 ADH1CP00326 375 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 FAM200BP0CF97 657 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
VPS41-201ENST00000265745 MESP2Q0VG99 397 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 C2orf27AQ580R0 203 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 LY6G5CQ5SRR4 150 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 KRT39Q6A163 491 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 CLEC20AQ6ZU45 233 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 KBTBD6Q86V97 674 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 SEMA4DQ92854 862 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 GLMNQ92990 594 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 OTUB2Q96DC9 234 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 ZC3H10Q96K80 434 aaKnown RBP10.28□□□□□ -0.76
VPS41-201ENST00000265745 PNKPQ96T60 521 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 NIF3L1Q9GZT8 377 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 TLR8Q9NR97 1041 aaKnown RBP10.28□□□□□ -0.76
VPS41-201ENST00000265745 KIAA1468Q9P260 1216 aa10.28□□□□□ -0.76
VPS41-201ENST00000265745 CDV3Q9UKY7 258 aaKnown RBP10.28□□□□□ -0.76
VPS41-201ENST00000265745 SCML2Q9UQR0 700 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms