RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 UBDO15205 165 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SSNA1O43805 119 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 YWHAQP27348 245 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ADSSP30520 456 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 NFIL3Q16649 462 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TSGA10IPQ3SY00 556 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PLA2G4FQ68DD2 849 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KYAT3Q6YP21 454 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 HEATR4Q86WZ0 1026 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KSR1Q8IVT5 923 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PJA1Q8NG27 643 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 UBASH3BQ8TF42 649 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LRRC1Q9BTT6 524 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 OSBPL11Q9BXB4 747 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 JMJD4Q9H9V9 463 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TCF7L2Q9NQB0 619 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 HOXC10Q9NYD6 342 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 WWOXQ9NZC7 414 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZNF624Q9P2J8 865 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 LNPEPQ9UIQ6 1025 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MCM8Q9UJA3 840 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 AATKQ6ZMQ8 1374 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 OR14I1A6ND48 311 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MGAT4DA6NG13 374 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 HOXC6P09630 235 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MSL3P1P0C860 447 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 GTF2E2P29084 291 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 SLC26A3P40879 764 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 OXCT1P55809 520 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 BTKQ06187 659 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZYXQ15942 572 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 DCAF6Q58WW2 860 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 DGKKQ5KSL6 1271 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MROH9Q5TGP6 573 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LRRC74BQ6ZQY2 392 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 EIF3MQ7L2H7 374 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 FAM220AQ7Z4H9 259 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 GPALPP1Q8IXQ4 340 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SLC7A14Q8TBB6 771 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 VCPIP1Q96JH7 1222 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ERGIC2Q96RQ1 377 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LRRC40Q9H9A6 602 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MLXIPLQ9NP71 852 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MCUBQ9NWR8 336 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PTCH1Q13635 1447 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ADGRL3Q9HAR2 1447 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KPNA6O60684 536 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 RPN2P04844 631 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SERPINE1P05121 402 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 HPGDP15428 266 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 HSF2Q03933 536 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 BNIP2Q12982 314 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 NAIF1Q69YI7 327 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 TYW3Q6IPR3 259 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 DENND5AQ6IQ26 1287 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 GLYCTKQ8IVS8 523 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PROX1Q92786 737 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TBCBQ99426 244 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 BTBD10Q9BSF8 475 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 MAN1C1Q9NR34 630 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 FEM1BQ9UK73 627 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PECAM1P16284 738 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 GTF2H1P32780 548 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 CBX5P45973 191 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 IREB2P48200 963 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZC2HC1CQ53FD0 456 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 EAPPQ56P03 285 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 PPM1LQ5SGD2 360 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SGMS1Q86VZ5 419 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LRRC47Q8N1G4 583 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ACTRT1Q8TDG2 376 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KCTD14Q9BQ13 255 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 PHF20Q9BVI0 1012 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 C1QTNF1Q9BXJ1 281 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 DSN1Q9H410 356 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KLHL11Q9NVR0 708 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 KCNK4Q9NYG8 393 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ERGIC3Q9Y282 383 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ACOT9Q9Y305 439 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ABCC10Q5T3U5 1492 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ERI2A8K979 691 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 TRIM66O15016 1216 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 AKAP8O43823 692 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 SEC24AO95486 1093 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 EYA4O95677 639 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TSHRP16473 764 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PPIBP23284 216 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 KPNA1P52294 538 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 EIF4A1P60842 406 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ATP2C1P98194 919 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 STK4Q13043 487 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ATP1A4Q13733 1029 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TTLL4Q14679 1199 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 RASA2Q15283 850 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LRRC41Q15345 812 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SWI5Q1ZZU3 235 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SMYD4Q8IYR2 804 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZNF671Q8TAW3 534 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms