RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 TWNKQ96RR1 684 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 NUDCD1Q96RS6 583 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 HERPUD2Q9BSE4 406 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 ELOVL4Q9GZR5 314 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 MCM8Q9UJA3 840 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 PPP2R3BQ9Y5P8 575 aa13.05□□□□□ -0.32
HERC6-201ENST00000264346 H3BRJ5 948 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 EPHB2P29323 1055 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 FAAP100Q0VG06 881 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 NXF3Q9H4D5 531 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 HEY2Q9UBP5 337 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 GOLGA8TH3BQL2 631 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 EEF2KO00418 725 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 CYB561D2O14569 222 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 MSCO60682 206 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 KRT34O76011 436 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 CBX6O95503 412 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 HSPA4LO95757 839 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 MCF2P10911 925 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 POLE2P56282 527 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 COPS2P61201 443 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 CHI3L2Q15782 390 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 MAP7D1Q3KQU3 841 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 PREPLQ4J6C6 727 aaPredicted RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 ATG16L1Q676U5 607 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 CRELD2Q6UXH1 353 aaPredicted RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 MTDHQ86UE4 582 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 ZNF669Q96BR6 464 aaPredicted RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 TTC1Q99614 292 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
HERC6-201ENST00000264346 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 CLDN5O00501 218 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 NEMP1O14524 444 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 GAD2Q05329 585 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 ZCCHC23Q6ZST2 131 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 BZW1Q7L1Q6 419 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 RASSF3Q86WH2 238 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 WDR75Q8IWA0 830 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 R3HDMLQ9H3Y0 253 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 UBQLN1Q9UMX0 589 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 TNFSF13BQ9Y275 285 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 PRG3Q9Y2Y8 225 aaPredicted RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.04□□□□□ -0.32
HERC6-201ENST00000264346 CITO14578 2027 aa13.04□□□□□ -0.32
HERC6-201ENST00000264346 ECM29Q5VYK3 1845 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 SNRPAP09012 282 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 RAD23BP54727 409 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 DPYSL3Q14195 570 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ZNF268Q14587 947 aaPredicted RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 PCSK7Q16549 785 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 KCNT2Q6UVM3 1135 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 NLRP9Q7RTR0 991 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ADGRF2Q8IZF7 708 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 CELF6Q96J87 481 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 PARK7Q99497 189 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 MRPL45Q9BRJ2 306 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 TUBGCP4Q9UGJ1 667 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 ARAP2Q8WZ64 1704 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 SNX3O60493 162 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 CRCPO75575 148 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 POMCP01189 267 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 CYP1A1P04798 512 aaPredicted RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 GNAT1P11488 350 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ECHS1P30084 290 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 MMP13P45452 471 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 GDF10P55107 478 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 KCNJ2P63252 427 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 OGDHQ02218 1023 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ASPHQ12797 758 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 SCARA3Q6AZY7 606 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ASB7Q9H672 318 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 PLEKHA5Q9HAU0 1116 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
HERC6-201ENST00000264346 SHOC2Q9UQ13 582 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 RPS6KL1Q9Y6S9 549 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 GSTA1P08263 222 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 GSTA2P09210 222 aa13.03□□□□□ -0.32
HERC6-201ENST00000264346 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms