RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 GEMP55040 296 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 BTKQ06187 659 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 FUT11Q495W5 492 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 TDRD5Q8NAT2 981 aaKnown RBP18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 RPRD1BQ9NQG5 326 aaKnown RBP18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 PDGFCQ9NRA1 345 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 ENOPH1Q9UHY7 261 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 HPS5Q9UPZ3 1129 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 CYP11B1P15538 503 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 VCLP18206 1134 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 KRT20P35900 424 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 AVPR1AP37288 418 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 FAM45AQ8TCE6 357 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 BLOC1S5Q8TDH9 187 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 DDIT4Q9NX09 232 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 SLC24A2Q9UI40 661 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 NAMPTP43490 491 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 BDH2Q9BUT1 245 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 SMIM31A0A1B0GVY4 71 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 IFNA14P01570 189 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 DENND5BQ6ZUT9 1274 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 TBC1D16Q8TBP0 767 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 TMBIM4Q9HC24 238 aa18.01■□□□□ 0.47
NOTCH3-201ENST00000263388 DNALI1O14645 258 aaPredicted RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 MTM1Q13496 603 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 CCDC153Q494R4 210 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 NEK10Q6ZWH5 1172 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 CDH24Q86UP0 819 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 CDK5RAP1Q96SZ6 601 aaKnown RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 CACNA2D2Q9NY47 1150 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 TRIM25Q14258 630 aaKnown RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 ARHGAP15Q53QZ3 475 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 STRA8Q7Z7C7 330 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 CAMKK2Q96RR4 588 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 SLIT1O75093 1534 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 STX7O15400 261 aaKnown RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 PLEKP08567 350 aaPredicted RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 RBP1P09455 135 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 NR2C2P49116 596 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 OOSP2Q86WS3 158 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 KCNB2Q92953 911 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 KLF6Q99612 283 aaPredicted RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 TAGLN3Q9UI15 199 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 ITGB1BP2Q9UKP3 347 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 STARD13Q9Y3M8 1113 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 STON1Q9Y6Q2 735 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 CRTAMO95727 393 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 NR3C2P08235 984 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 C11orf96Q7Z7L8 435 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 L2HGDHQ9H9P8 463 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 COMMD8Q9NX08 183 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 M0QYT0 321 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 DSEQ9UL01 958 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 CENPXA8MT69 81 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 F9P00740 461 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 KRT6BP04259 564 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 KRT6CP48668 564 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 ZNF177Q13360 481 aaPredicted RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 TRIM48Q8IWZ4 208 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 TFE3P19532 575 aaPredicted RBP18■□□□□ 0.47
NOTCH3-201ENST00000263388 GRK3P35626 688 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 OR1G1P47890 313 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 WDR48Q8TAF3 677 aa18■□□□□ 0.47
NOTCH3-201ENST00000263388 MAGEB16A2A368 324 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 CAPN1P07384 714 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 LRRC34Q8IZ02 419 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 CAVIN3Q969G5 261 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 CLPBQ9H078 707 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 MZF1P28698 734 aaPredicted RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 COX10Q12887 443 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 ATP6AP1LQ52LC2 224 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 DPP10Q8N608 796 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 ZFRQ96KR1 1074 aaKnown RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 DDR2Q16832 855 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 USP39Q53GS9 565 aaKnown RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 ZFP1Q6P2D0 407 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 SNX13Q9Y5W8 968 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 GUCA1AP43080 201 aaPredicted RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 RXRGP48443 463 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 PURAQ00577 322 aaKnown RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 UTP6Q9NYH9 597 aaKnown RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 A0A087X0T9 212 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 MGAT4DA6NG13 374 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 ATP5BP06576 529 aaKnown RBP17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 FAM228BP0C875 321 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 KLHL12Q53G59 568 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 FIGNQ5HY92 759 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 FBXO36Q8NEA4 188 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 PNKPQ96T60 521 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 EMILIN2Q9BXX0 1053 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 VANGL2Q9ULK5 521 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 TEX28O15482 410 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 PGBD3Q8N328 593 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 UBAP1Q9NZ09 502 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 PIK3CDO00329 1044 aa17.99■□□□□ 0.47
NOTCH3-201ENST00000263388 UBXN6Q9BZV1 441 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms