RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 FOXP1Q9H334 677 aaPredicted RBP8.68□□□□□ -1.02
LDB3-201ENST00000263066 SIAEQ9HAT2 523 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 USP29Q9HBJ7 922 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 ZFYVE28Q9HCC9 887 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 ZNF304Q9HCX3 659 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 SAR1AQ9NR31 198 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 WDR70Q9NW82 654 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 NYAP2Q9P242 653 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 PPM1HQ9ULR3 514 aa8.68□□□□□ -1.02
LDB3-201ENST00000263066 C4AP0C0L4 1744 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 C4BP0C0L5 1744 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 GOLGA8QA0A0J9YX86 632 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 CCDC195A0A1B0GUA6 201 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 GUCY1B2O75343 617 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 MTRF1O75570 445 aaKnown RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 USP2O75604 605 aaPredicted RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 FARP2O94887 1054 aaPredicted RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 TAC1P20366 129 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 KRT6CP48668 564 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PHC1P78364 1004 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 CETN1Q12798 172 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TRPC3Q13507 836 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 ADRM1Q16186 407 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PGS1Q32NB8 556 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 SLC45A4Q5BKX6 768 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 RFPL4BQ6ZWI9 263 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TLK2Q86UE8 772 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 FAM83AQ86UY5 434 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 FAM9CQ8IZT9 166 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TCAIMQ8N3R3 496 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 EFCAB3Q8N7B9 438 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 DEPDC7Q96QD5 511 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 C8orf4Q9NR00 106 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TYW1Q9NV66 732 aaKnown RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 FKBP14Q9NWM8 211 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 MAD2L2Q9UI95 211 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 BTAF1O14981 1849 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 POTEB3A0JP26 581 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 ANKRD34BA5PLL1 514 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TMEM150BA6NC51 233 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 POTECB2RU33 542 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 FCHO1O14526 889 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 LY75O60449 1722 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 BAIAP3O94812 1187 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 MYL2P10916 166 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 FOSL1P15407 271 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 ELNP15502 786 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 MAP1BP46821 2468 aaKnown RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 CYP2J2P51589 502 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TMPRSS15P98073 1019 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 LRRC63Q05C16 580 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PDK1Q15118 436 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 SLC18A3Q16572 532 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PPP6R3Q5H9R7 873 aaPredicted RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 SPOUT1Q5T280 376 aaKnown RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 NT5DC1Q5TFE4 455 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 POTEBQ6S5H4 581 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 POTEGQ6S5H5 508 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TMPRSS6Q8IU80 811 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 DCAF4Q8WV16 495 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 KRT35Q92764 455 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 CAPNS2Q96L46 248 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 NAALADL1Q9UQQ1 740 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 MYH3P11055 1940 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 GAKO14976 1311 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TTC34A8MYJ7 566 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 FOXP2O15409 715 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A9O60656 530 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PHF2O75151 1096 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 IFNB1P01574 187 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 EIF2S1P05198 315 aaKnown RBP8.67□□□□□ -1.02
LDB3-201ENST00000263066 NR3C2P08235 984 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 RARGP13631 454 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A6P19224 532 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A1P22309 533 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A4P22310 534 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A3P35503 534 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A5P35504 534 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 KRT20P35900 424 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 BLVRAP53004 296 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 SF3B4Q15427 424 aaKnown RBP eCLIP8.67□□□□□ -1.02
LDB3-201ENST00000263066 KCNJ8Q15842 424 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 CYP2A13Q16696 494 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 SGO2Q562F6 1265 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 RGMBQ6NW40 437 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TEKT3Q9BXF9 490 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TMEM120AQ9BXJ8 343 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 TRPV6Q9H1D0 765 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PCIF1Q9H4Z3 704 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 CCDC134Q9H6E4 229 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A7Q9HAW7 530 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A10Q9HAW8 530 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 UGT1A8Q9HAW9 530 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 PARVGQ9HBI0 331 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.67□□□□□ -1.02
LDB3-201ENST00000263066 INPP5FQ9Y2H2 1132 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 RIPK3Q9Y572 518 aa8.67□□□□□ -1.02
LDB3-201ENST00000263066 ECM29Q5VYK3 1845 aa8.66□□□□□ -1.02
LDB3-201ENST00000263066 KLRG2A4D1S0 409 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms