RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 COPS2P61201 443 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 ADIGQ0VDE8 80 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 BST2Q10589 180 aaKnown RBP14.18□□□□□ -0.14
VMP1-201ENST00000262291 PCBP1Q15365 356 aaKnown RBP eCLIP14.18□□□□□ -0.14
VMP1-201ENST00000262291 ANKRD22Q5VYY1 191 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 TMEM110Q86TL2 294 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 RSPH3Q86UC2 560 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 UNC93AQ86WB7 457 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 ANKRD52Q8NB46 1076 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 CMASQ8NFW8 434 aaPredicted RBP14.18□□□□□ -0.14
VMP1-201ENST00000262291 SELENOSQ9BQE4 189 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 MAK16Q9BXY0 300 aaKnown RBP14.18□□□□□ -0.14
VMP1-201ENST00000262291 SAYSD1Q9NPB0 183 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 PPANQ9NQ55 473 aaKnown RBP14.18□□□□□ -0.14
VMP1-201ENST00000262291 NINJ2Q9NZG7 142 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 TBK1Q9UHD2 729 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 NOD1Q9Y239 953 aa14.18□□□□□ -0.14
VMP1-201ENST00000262291 XPOTO43592 962 aaKnown RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 EIF3EP60228 445 aaKnown RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 ADCY1Q08828 1119 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 DPYSL3Q14195 570 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SYDE1Q6ZW31 735 aaPredicted RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 PIGZQ86VD9 579 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 FUKQ8N0W3 1084 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 TTC39CQ8N584 583 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SLC35B2Q8TB61 432 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SPATA18Q8TC71 538 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 CD99L2Q8TCZ2 262 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SENP8Q96LD8 212 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SNRNP25Q9BV90 132 aaKnown RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 GDAP2Q9NXN4 497 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 NR2E3Q9Y5X4 410 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 PDCD11Q14690 1871 aaKnown RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 RGS16O15492 202 aaPredicted RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 NUDT17P0C025 328 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 PEX19P40855 299 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 HDAC4P56524 1084 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SARNPP82979 210 aaKnown RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 SKOR1P84550 965 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 SPRED3Q2MJR0 410 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 BBS12Q6ZW61 710 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 ANKMY2Q8IV38 441 aa14.17□□□□□ -0.14
VMP1-201ENST00000262291 RBM15Q96T37 977 aaKnown RBP eCLIP14.17□□□□□ -0.149e-6■□□□□ 8.2
VMP1-201ENST00000262291 DDX43Q9NXZ2 648 aaKnown RBP14.17□□□□□ -0.14
VMP1-201ENST00000262291 TCRBV7S3A2A0A539 114 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 RASGRF2O14827 1237 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 THP07101 528 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 CREB1P16220 341 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 BCAT1P54687 386 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 STILQ15468 1287 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 ARHGAP17Q68EM7 881 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 HIBCHQ6NVY1 386 aaPredicted RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 DSTYKQ6XUX3 929 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 CRYBG2Q8N1P7 616 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 PYROXD2Q8N2H3 581 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 RSAD2Q8WXG1 361 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 MFHAS1Q9Y4C4 1052 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 MYBPHLA2RUH7 354 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 EME2A4GXA9 379 aaPredicted RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 DNALI1O14645 258 aaPredicted RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 RBP3P10745 1247 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 PTPN1P18031 435 aaKnown RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 LSP1P33241 339 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 PNPLA4P41247 253 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 BRCC3P46736 316 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 CACNA2D1P54289 1103 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 SP3Q02447 781 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 PAQR9Q6ZVX9 377 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 HOOK3Q86VS8 718 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 CCDC185Q8N715 623 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 KCNK16Q96T55 309 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 TBCBQ99426 244 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 DHX35Q9H5Z1 703 aaKnown RBP14.16□□□□□ -0.14
VMP1-201ENST00000262291 CRTAC1Q9NQ79 661 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 TMEM30AQ9NV96 361 aa14.16□□□□□ -0.14
VMP1-201ENST00000262291 F5H423 210 aaPredicted RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 H7C0C1 242 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 KPNA6O60684 536 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 RASSF9O75901 435 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 IL4RP24394 825 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 YY1P25490 414 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 RPL22P35268 128 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 PCK1P35558 622 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 MDH1P40925 334 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 ATP5OP48047 213 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 EIF3BP55884 814 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 PPP2R2AP63151 447 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 MGAT3Q09327 533 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 FAXCQ5TGI0 409 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 AGBL2Q5U5Z8 902 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 DARS2Q6PI48 645 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 HFE2Q6ZVN8 426 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 FAM131BQ86XD5 332 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 NKD2Q969F2 451 aaPredicted RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 ADAM2Q99965 735 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 TRPV6Q9H1D0 765 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms