RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RFFLQ8WZ73 363 aa28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 MCEEQ96PE7 176 aa28.85■■■□□ 2.21
SMARCD3-201ENST00000262188 PTPROQ16827 1216 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 NYAP1Q6ZVC0 841 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 NUP93Q8N1F7 819 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 C3orf20Q8ND61 904 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 SLC22A17Q8WUG5 538 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 KHSRPQ92945 711 aaKnown RBP eCLIP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 TRIM11Q96F44 468 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 TLE6Q9H808 572 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 STRIP2Q9ULQ0 834 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 EYSQ5T1H1 3165 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 YJEFN3A6XGL0 299 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 E7ENQ6 273 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 RFPL2O75678 378 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 C8AP07357 584 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 MYBL1P10243 752 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 NAP1L1P55209 391 aaKnown RBP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 RPL10AP62906 217 aaKnown RBP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 ZNF268Q14587 947 aaPredicted RBP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 PDE12Q6L8Q7 609 aaKnown RBP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 DENND5BQ6ZUT9 1274 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 BHLHA9Q7RTU4 235 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 CPNE8Q86YQ8 564 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 MRPL38Q96DV4 380 aaKnown RBP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 LMAN2LQ9H0V9 348 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 PNPLA8Q9NP80 782 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 MAN1C1Q9NR34 630 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 RRP15Q9Y3B9 282 aaKnown RBP28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 HCFC2Q9Y5Z7 792 aa28.84■■■□□ 2.21
SMARCD3-201ENST00000262188 SLC38A8A6NNN8 435 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 ZBED1O96006 694 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 SLC6A3Q01959 620 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 ZNF697Q5TEC3 545 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 PRPF38BQ5VTL8 546 aaKnown RBP28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 TRNP1Q6NT89 227 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 PPP1R2P3Q6NXS1 205 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 ZNF564Q8TBZ8 553 aaPredicted RBP28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 SELENOOQ9BVL4 669 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 IGFLR1Q9H665 355 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 CYLDQ9NQC7 956 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 AVENQ9NQS1 362 aaPredicted RBP28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 PARVAQ9NVD7 372 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 CAPN6Q9Y6Q1 641 aa28.83■■■□□ 2.21
SMARCD3-201ENST00000262188 KRT86O43790 486 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 RFC1P35251 1148 aaPredicted RBP28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 ALDH1A3P47895 512 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 DAOAP59103 153 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 MRPS5P82675 430 aaKnown RBP28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 OGDHQ02218 1023 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 PPP1R15BQ5SWA1 713 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 USP3Q9Y6I4 520 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 GREB1Q4ZG55 1949 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 ELF2Q15723 593 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 VN1R2Q8NFZ6 395 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 EXOC4Q96A65 974 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 FAM149B1Q96BN6 582 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 SPATA17Q96L03 361 aa28.82■■■□□ 2.2
SMARCD3-201ENST00000262188 TMEM110-MUSTN1A8MSY1 372 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 ZRANB2O95218 330 aaKnown RBP eCLIP28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 KRT3P12035 628 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 DAB2IPQ5VWQ8 1189 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 EGFL6Q8IUX8 553 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 ANAPC7Q9UJX3 599 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 HYOU1Q9Y4L1 999 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 MYO16Q9Y6X6 1858 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 CCL16O15467 120 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 FLT3P36888 993 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 TSGA10Q9BZW7 698 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 CNGB3Q9NQW8 809 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 GMIPQ9P107 970 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 HSFX1Q9UBD0 423 aa28.81■■■□□ 2.2
SMARCD3-201ENST00000262188 DUSP6Q16828 381 aa28.8■■■□□ 2.2
SMARCD3-201ENST00000262188 DCUN1D2Q6PH85 259 aa28.8■■■□□ 2.2
SMARCD3-201ENST00000262188 NMUR1Q9HB89 426 aa28.8■■■□□ 2.2
SMARCD3-201ENST00000262188 WDR35Q9P2L0 1181 aa28.8■■■□□ 2.2
SMARCD3-201ENST00000262188 TMEM59LQ9UK28 342 aa28.8■■■□□ 2.2
SMARCD3-201ENST00000262188 ZNF638Q14966 1978 aaKnown RBP28.8■■■□□ 2.2
SMARCD3-201ENST00000262188 SIGLEC16A6NMB1 481 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 HMGA1P17096 107 aaKnown RBP28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 ZNF252P-AS1Q0IIN9 211 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 TAF10Q12962 218 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 PLD1Q13393 1074 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 TCEAL5Q5H9L2 206 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 PM20D1Q6GTS8 502 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 ZNF662Q6ZS27 426 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 EDEM1Q92611 657 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 OSER1Q9NX31 292 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 PRRC2BQ5JSZ5 2229 aaKnown RBP28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 ADGRE1Q14246 886 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 RAB6CQ53S08 254 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 SCD5Q86SK9 330 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 RHOT2Q8IXI1 618 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 TPCN2Q8NHX9 752 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 PPM1EQ8WY54 764 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 RAB6CQ9H0N0 254 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 L2HGDHQ9H9P8 463 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 NUDT5Q9UKK9 219 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 SCINQ9Y6U3 715 aa28.79■■■□□ 2.2
SMARCD3-201ENST00000262188 MTCL1Q9Y4B5 1905 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms