RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CLDN3O15551 220 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 NDUFA10O95299 355 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 PRAMEF12O95522 483 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 UCHL3P15374 230 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 APBA1Q02410 837 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 SOX4Q06945 474 aaPredicted RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 MCL1Q07820 350 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 CYP24A1Q07973 514 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 DMC1Q14565 340 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 USP39Q53GS9 565 aaKnown RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 TRIM61Q5EBN2 209 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 SFMBT2Q5VUG0 894 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 ZNF280DQ6N043 979 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 TRIM65Q6PJ69 517 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 PIP4P1Q86T03 277 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 C11orf74Q86VG3 221 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 EHBP1Q8NDI1 1231 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 RPLP0P6Q8NHW5 317 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 PARD3BQ8TEW8 1205 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 NUSAP1Q9BXS6 441 aaKnown RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 TPSD1Q9BZJ3 242 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 CDT1Q9H211 546 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 CCDC86Q9H6F5 360 aaKnown RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 NHEJ1Q9H9Q4 299 aaPredicted RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 AIPL1Q9NZN9 384 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 EVLQ9UI08 416 aaPredicted RBP14.13□□□□□ -0.15
SGCA-201ENST00000262018 NUB1Q9Y5A7 615 aa14.13□□□□□ -0.15
SGCA-201ENST00000262018 LOC400499M0QZD8 3231 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 SMIM28A0A1B0GU29 152 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 CYSRT1A8MQ03 144 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 EIF3CLB5ME19 914 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 ABLIM1O14639 778 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 LDHAP00338 332 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 BCKDHBP21953 392 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 GTF2H1P32780 548 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 MATR3P43243 847 aaKnown RBP eCLIP14.12□□□□□ -0.15
SGCA-201ENST00000262018 EPHB3P54753 998 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 PPP3CAQ08209 521 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 PLD1Q13393 1074 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 ARHGAP15Q53QZ3 475 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 HGSNATQ68CP4 663 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 GAREM2Q75VX8 874 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 SYT13Q7L8C5 426 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 MTERF4Q7Z6M4 381 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 RAB44Q7Z6P3 723 aaPredicted RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 USP37Q86T82 979 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 ACRBPQ8NEB7 543 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 LMO3Q8TAP4 145 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 EIF3CQ99613 913 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 HAPLN2Q9GZV7 340 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 INTS2Q9H0H0 1204 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 FBRSL1Q9HCM7 1045 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 ARHGAP20Q9P2F6 1191 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 AGO2Q9UKV8 859 aaKnown RBP14.12□□□□□ -0.15
SGCA-201ENST00000262018 FHOD1Q9Y613 1164 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 THADAQ6YHU6 1953 aa14.12□□□□□ -0.15
SGCA-201ENST00000262018 NAV2Q8IVL1 2488 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 A0A0B4J269 797 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 SSU72P8A0A1W2PR75 194 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 DYNC1I1O14576 645 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 ENGP17813 658 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 GRM5P41594 1212 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 JAM2P57087 298 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 FAM193AP78312 1265 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 C19orf57Q0VDD7 668 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 CETN1Q12798 172 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 SEMA3BQ13214 749 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 RUNX3Q13761 415 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 KYAT1Q16773 422 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 TSTD1Q8NFU3 115 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 CHFRQ96EP1 664 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 ZBTB45Q96K62 511 aaPredicted RBP14.11□□□□□ -0.15
SGCA-201ENST00000262018 PGLYRP2Q96PD5 576 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 SMG9Q9H0W8 520 aaKnown RBP14.11□□□□□ -0.15
SGCA-201ENST00000262018 EBF3Q9H4W6 596 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 HPS4Q9NQG7 708 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 CACNA2D2Q9NY47 1150 aa14.11□□□□□ -0.15
SGCA-201ENST00000262018 REXO2Q9Y3B8 237 aaKnown RBP14.11□□□□□ -0.15
SGCA-201ENST00000262018 ASXL3Q9C0F0 2248 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 ACACAQ13085 2346 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 OTOL1A6NHN0 477 aaPredicted RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 LRRIQ3A6PVS8 624 aaPredicted RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 OGTO15294 1046 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 LCA5LO95447 670 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 SERPING1P05155 500 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 HARSP12081 509 aaKnown RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 DRD1P21728 446 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 GABRR2P28476 465 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 EIF4A3P38919 411 aaKnown RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 ALDH1A3P47895 512 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 GCLMP48507 274 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 MXI1P50539 228 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 GALK1P51570 392 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 CLDN10P78369 228 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 KRT83P78385 493 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 DUSP4Q13115 394 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 PSMD6Q15008 389 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms