RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 VTNP04004 478 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 ZRSR2Q15696 482 aaKnown RBP23.54■■□□□ 1.36
MCF2L-201ENST00000261963 ANKMY2Q8IV38 441 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 UNC45BQ8IWX7 931 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 PPIL6Q8IXY8 311 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 PHC3Q8NDX5 983 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 DENND1AQ8TEH3 1009 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 HPDLQ96IR7 371 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 PEBP4Q96S96 227 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 ZCWPW1Q9H0M4 648 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 TLE6Q9H808 572 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 NDC80O14777 642 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 ASMTLO95671 621 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 TTLL12Q14166 644 aaPredicted RBP23.54■■□□□ 1.36
MCF2L-201ENST00000261963 KHDC1Q4VXA5 237 aaKnown RBP23.54■■□□□ 1.36
MCF2L-201ENST00000261963 SPDYAQ5MJ70 313 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 FNBP1LQ5T0N5 605 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 SNX30Q5VWJ9 437 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 TRNP1Q6NT89 227 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 TAPT1Q6NXT6 567 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 MAMDC4Q6UXC1 1216 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 KCTD6Q8NC69 237 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 UBA3Q8TBC4 463 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 PPP1R12CQ9BZL4 782 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 UBN1Q9NPG3 1134 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 USP18Q9UMW8 372 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 AKT3Q9Y243 479 aa23.54■■□□□ 1.36
MCF2L-201ENST00000261963 ASB14A6NK59 587 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 HMGCRP04035 888 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 VDRP11473 427 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 PCGF5Q86SE9 256 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 RFX6Q8HWS3 928 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 HSPH1Q92598 858 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 HEXIM2Q96MH2 286 aaKnown RBP23.53■■□□□ 1.36
MCF2L-201ENST00000261963 TRABDQ9H4I3 376 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 PCMTD2Q9NV79 361 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 SBF1O95248 1867 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 A0A1B0GVG6 124 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 TCRBV7S3A2A0A539 114 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 PRPF4O43172 522 aaKnown RBP eCLIP23.53■■□□□ 1.363e-6■□□□□ 11.3
MCF2L-201ENST00000261963 OCRLQ01968 901 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 RAB6CQ53S08 254 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 FAM102AQ5T9C2 384 aaPredicted RBP23.53■■□□□ 1.36
MCF2L-201ENST00000261963 SH3PXD2AQ5TCZ1 1133 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 FOXB2Q5VYV0 432 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 C4orf50Q6ZRC1 276 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 CYP4V2Q6ZWL3 525 aaPredicted RBP23.53■■□□□ 1.36
MCF2L-201ENST00000261963 RAB6CQ9H0N0 254 aa23.53■■□□□ 1.36
MCF2L-201ENST00000261963 APOC4-APOC2K7ER74 178 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 APOC2P02655 101 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 CACNA2D1P54289 1103 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 INCA1Q0VD86 236 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 LAMC2Q13753 1193 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 TMEM132DQ14C87 1099 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 EFHC2Q5JST6 749 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 FASTKD5Q7L8L6 764 aaKnown RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 TAB3Q8N5C8 712 aaPredicted RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 SCG3Q8WXD2 468 aaKnown RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 RSAD2Q8WXG1 361 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 PIWIL1Q96J94 861 aaKnown RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 ADPGKQ9BRR6 497 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 LNPEPQ9UIQ6 1025 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 MAGEA13PA6NCF6 341 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 HNRNPCL1O60812 293 aaKnown RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 TMEM63AO94886 807 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 ZNF143P52747 638 aaPredicted RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 NDST1P52848 882 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 ACAP1Q15027 740 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 RASA2Q15283 850 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 TAF1BQ53T94 588 aaPredicted RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 DPH6Q7L8W6 267 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 CCDC125Q86Z20 511 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 MRRFQ96E11 262 aaKnown RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 DTNBP1Q96EV8 351 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 PHACTR1Q9C0D0 580 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 SLC24A2Q9UI40 661 aa23.52■■□□□ 1.36
MCF2L-201ENST00000261963 BARX2Q9UMQ3 279 aaPredicted RBP23.52■■□□□ 1.36
MCF2L-201ENST00000261963 ZNF286BP0CG31 522 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 CYP2C8P10632 490 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 P4HA1P13674 534 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 GJA5P36382 358 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 NRLP54845 237 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 ZC3H18Q86VM9 953 aaKnown RBP23.51■■□□□ 1.35
MCF2L-201ENST00000261963 C4orf33Q8N1A6 199 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 FAM71DQ8N9W8 422 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 SHCBP1Q8NEM2 672 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 FAM81AQ8TBF8 368 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 C10orf82Q8WW14 230 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 SPOCK2Q92563 424 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 SLCO1B3Q9NPD5 702 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 RABGEF1Q9UJ41 708 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 ZFP69BQ9UJL9 534 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 EDF1O60869 148 aaKnown RBP23.51■■□□□ 1.35
MCF2L-201ENST00000261963 PYGLP06737 847 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 KRT15P19012 456 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 ARL4CP56559 192 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 EIF3EP60228 445 aaKnown RBP23.51■■□□□ 1.35
MCF2L-201ENST00000261963 MMRN1Q13201 1228 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 SPARCL1Q14515 664 aa23.51■■□□□ 1.35
MCF2L-201ENST00000261963 LRRC23Q53EV4 343 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms