RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LENG9Q96B70 501 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 WRNIP1Q96S55 665 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 PCDH9Q9HC56 1237 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 KCNK4Q9NYG8 393 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 RPL26L1Q9UNX3 145 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 AURKCQ9UQB9 309 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 CNTNAP2Q9UHC6 1331 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 TBX3O15119 743 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 KRT3P12035 628 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 PSMC3P17980 439 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 KLRC2P26717 231 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 TAF5Q15542 800 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 EFHC2Q5JST6 749 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 N4BP2L1Q5TBK1 243 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF554Q86TJ5 538 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 SLC26A11Q86WA9 606 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 UNC5BQ8IZJ1 945 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 DAW1Q8N136 415 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 RRN3Q9NYV6 651 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 THEGQ9P2T0 379 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 POMPQ9Y244 141 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 STK24Q9Y6E0 443 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 SCN11AQ9UI33 1791 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 CXorf49A8MYA2 514 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 TCEA3O75764 348 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 CDC42EP5Q6NZY7 148 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 PATL1Q86TB9 770 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF398Q8TD17 642 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 ZBTB45Q96K62 511 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 KCNK13Q9HB14 408 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 GNEQ9Y223 722 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 ITM2AO43736 263 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 PRKD1Q15139 912 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 TLR1Q15399 786 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 SNX32Q86XE0 403 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 YIPF2Q9BWQ6 316 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 FOXP3Q9BZS1 431 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 IL1RL2Q9HB29 575 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 CDH22Q9UJ99 828 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 TRIM43BA6NCK2 446 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 DDTLA6NHG4 134 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 RPL10P27635 214 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 PCSK6P29122 969 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 CSE1LP55060 971 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 MYLK3Q32MK0 819 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 CIAPIN1Q6FI81 312 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 PDSS2Q86YH6 399 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 SNX31Q8N9S9 440 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 TMEM79Q9BSE2 394 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 PRM3Q9NNZ6 103 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 BLOC1S6Q9UL45 172 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 UBE4BO95155 1302 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 ARHGEF37A1IGU5 675 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 STX16-NPEPL1H3BU86 382 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 MAGEC1O60732 1142 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 P4HBP07237 508 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 MCF2P10911 925 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 OSBPP22059 807 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 LPIN1Q14693 890 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 MYO1HQ8N1T3 1032 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 BHLHE22Q8NFJ8 381 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 TMEM143Q96AN5 459 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 CMTM5Q96DZ9 223 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 AGAP3Q96P47 875 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 WDR55Q9H6Y2 383 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 TBX20Q9UMR3 447 aa16.49■□□□□ 0.23
PRPF40B-201ENST00000261897 A0A1B0GTW7 788 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 STRNO43815 780 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 PDGFRBP09619 1106 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 NPTX2P47972 431 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 SLC1A6P48664 564 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 GTF2A2P52657 109 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 PLOD1Q02809 727 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 CCDC92Q53HC0 331 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 ZC3H3Q8IXZ2 948 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 TTC13Q8NBP0 860 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 TMEM35BQ8NCS4 154 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 TMA7Q9Y2S6 64 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 TAF1P21675 1872 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 RNF103-CHMP3A0A140T963 221 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 GLRBP48167 497 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 EIF2B2P49770 351 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 ENTPD1P49961 510 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 GEN1Q17RS7 908 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 FBXL19Q6PCT2 694 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 TRMT10BQ6PF06 316 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 ADGRD1Q6QNK2 874 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 KATNAL2Q8IYT4 538 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 PHTF2Q8N3S3 785 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 STKLD1Q8NE28 680 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 GABPB2Q8TAK5 448 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 TMIGD2Q96BF3 282 aa16.48■□□□□ 0.23
PRPF40B-201ENST00000261897 KCNK16Q96T55 309 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms