RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PI4K2BG5E9Z4 385 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DEAF1O75398 565 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 APRTP07741 180 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TPBGLP0DKB5 382 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GHRP10912 638 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 IFNGR2P38484 337 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF284Q2VY69 593 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PDPK2PQ6A1A2 396 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF467Q7Z7K2 595 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 IRGQQ8WZA9 623 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ANKRD7Q92527 254 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MUC3BQ9H195 1237 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GTSE1Q9NYZ3 720 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ASTN2O75129 1339 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SAC3D1A6NKF1 404 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 IFRD1O00458 451 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 FKBP6O75344 327 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 EIF2S1P05198 315 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PEX5P50542 639 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GRB10Q13322 594 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 FAM92BQ6ZTR7 304 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TIFAQ96CG3 184 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MAGED4Q96JG8 741 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MCEEQ96PE7 176 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 AP1M1Q9BXS5 423 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SAR1AQ9NR31 198 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ADAM30Q9UKF2 790 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SNX24Q9Y343 169 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DFFAO00273 331 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GGCXP38435 758 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PNLIPRP1P54315 467 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 VCPP55072 806 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 HUNKP57058 714 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MGAT5Q09328 741 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 RRP1BQ14684 758 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TRMT5Q32P41 509 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ERAP2Q6P179 960 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CEP70Q8NHQ1 597 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 WDR41Q9HAD4 459 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 NMRAL1Q9HBL8 299 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 RAB6BQ9NRW1 208 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CDH9Q9ULB4 789 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 COL6A1P12109 1028 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PTRHD1Q6GMV3 140 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DNAJB7Q7Z6W7 309 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SLC26A11Q86WA9 606 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 FNIP1Q8TF40 1166 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 VPS33AQ96AX1 596 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CCDC28BQ9BUN5 200 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 NEK6Q9HC98 313 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ITGB1BP2Q9UKP3 347 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ALG6Q9Y672 507 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DIAPH2O60879 1101 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 DNAJA2O60884 412 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 UQCRBP14927 111 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SAT1P21673 171 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ADORA2BP29275 332 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 KCNK10P57789 538 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 HERVK_113P62684 666 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF394Q53GI3 561 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 BRMS1LQ5PSV4 323 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ERMARDQ5T6L9 678 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MREGQ8N565 214 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ZNF655Q8N720 491 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 INPP5DQ92835 1189 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SAAL1Q96ER3 474 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 APBA2Q99767 749 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 KCNMB3Q9NPA1 279 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MAGED2Q9UNF1 606 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MAST2Q6P0Q8 1798 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 MED24O75448 989 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 INTS6LQ5JSJ4 861 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 DACT2Q5SW24 774 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NOL9Q5SY16 702 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 LMBRD2Q68DH5 695 aaPredicted RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TAS2R42Q7RTR8 314 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ANKRD13CQ8N6S4 541 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 GPR63Q9BZJ6 419 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 IL22Q9GZX6 179 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ABCC13Q9NSE7 274 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SCN3BQ9NY72 215 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 COPG1Q9Y678 874 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 CALB2P22676 271 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NOGQ13253 232 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PTK7Q13308 1070 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ZCCHC8Q6NZY4 707 aaKnown RBP4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NFRKBQ6P4R8 1299 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 BHLHB9Q6PI77 547 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 ULK2Q8IYT8 1036 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 TOP6BLQ8N6T0 577 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 PPTC7Q8NI37 304 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 VPS11Q9H270 941 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 LHX5Q9H2C1 402 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 IRAK4Q9NWZ3 460 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 Q9Y3F1 56 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 NR2E3Q9Y5X4 410 aa4.45□□□□□ -1.7
VPS13C-202ENST00000261517 SF3B1O75533 1304 aaKnown RBP eCLIP4.45□□□□□ -1.78e-6■■■■■ 94.3
VPS13C-202ENST00000261517 CLGNO14967 610 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms