RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 C3orf58Q8NDZ4 430 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 SEPT11Q9NVA2 429 aaKnown RBP19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 TBC1D13Q9NVG8 400 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 NENFQ9UMX5 172 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 SLC4A7Q9Y6M7 1214 aa19.78■□□□□ 0.76
COL4A3BP-201ENST00000261415 O00370 1275 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 MAP3K13O43283 966 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 SNX3O60493 162 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 CILPO75339 1184 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 FMO1Q01740 532 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 DEUP1Q05D60 604 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 RNF220Q5VTB9 566 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 PALB2Q86YC2 1186 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 NPAS4Q8IUM7 802 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 CFAP61Q8NHU2 1237 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 MDM1Q8TC05 714 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 ATXN2LQ8WWM7 1075 aaKnown RBP19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 GALNT8Q9NY28 637 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 KANSL3Q9P2N6 904 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 HMGXB4Q9UGU5 601 aa19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 USP15Q9Y4E8 981 aaPredicted RBP19.77■□□□□ 0.76
COL4A3BP-201ENST00000261415 SUN1O94901 812 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 MMP13P45452 471 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 RAD23BP54727 409 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 SOWAHAQ2M3V2 549 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 TTC39CQ8N584 583 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 DDX27Q96GQ7 796 aaKnown RBP19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 UROC1Q96N76 676 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 TWNKQ96RR1 684 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 MRPL45Q9BRJ2 306 aaKnown RBP19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 BARX2Q9UMQ3 279 aaPredicted RBP19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 ZNF510Q9Y2H8 683 aa19.77■□□□□ 0.75
COL4A3BP-201ENST00000261415 COL4A6Q14031 1691 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 VWA8A3KMH1 1905 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 HOXA2O43364 376 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 B4GALT3O60512 393 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 ATP6V1G1O75348 118 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 DDHD2O94830 711 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 MAGEA1P43355 309 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 GATMP50440 423 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 PPARDQ03181 441 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 DSC1Q08554 894 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 ALKBH5Q6P6C2 394 aaKnown RBP19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 ZNF677Q86XU0 584 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 ZNF280BQ86YH2 543 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 STK32AQ8WU08 396 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 DNAJC9Q8WXX5 260 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 CCDC97Q96F63 343 aaPredicted RBP19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 CES2O00748 559 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 RNASELQ05823 741 aaKnown RBP19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 TRADDQ15628 312 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 CASD1Q96PB1 797 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 ELOVL4Q9GZR5 314 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 TMEM59LQ9UK28 342 aa19.76■□□□□ 0.75
COL4A3BP-201ENST00000261415 ABHD14A-ACY1A0A1B0GW23 586 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 THAP12O43422 761 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 PFKMP08237 780 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 NDST1P52848 882 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 ORC1Q13415 861 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 LIMS2Q7Z4I7 341 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 APPL2Q8NEU8 664 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 PCDHB18PQ96TA0 734 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 SLX1AQ9BQ83 275 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 INTS9Q9NV88 658 aaKnown RBP19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 PRKAG2Q9UGJ0 569 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 KIAA1671Q9BY89 1806 aa19.75■□□□□ 0.75
COL4A3BP-201ENST00000261415 BHMG1C9JSJ3 638 aaPredicted RBP19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 HUS1O60921 280 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 OAS1P00973 400 aaKnown RBP19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 PARP6Q2NL67 630 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 SH2D4BQ5SQS7 431 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 CROCCP2Q86T23 111 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 COLGALT2Q8IYK4 626 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 TOP6BLQ8N6T0 577 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 SLC4A11Q8NBS3 891 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 LUC7LQ9NQ29 371 aaKnown RBP19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 B3GAT3O94766 335 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 ACRP10323 421 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 CCNB1P14635 433 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 PAN2Q504Q3 1202 aaKnown RBP19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 C10orf76Q5T2E6 689 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 KIF2BQ8N4N8 673 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 ENDOVQ8N8Q3 282 aaKnown RBP19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 ZNF606Q8WXB4 792 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 PGM2Q96G03 612 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 TMEM176AQ96HP8 235 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 FAM193BQ96PV7 902 aaPredicted RBP19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 RMI1Q9H9A7 625 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 RXFP1Q9HBX9 757 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 CIDEBQ9UHD4 219 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 NME7Q9Y5B8 376 aa19.74■□□□□ 0.75
COL4A3BP-201ENST00000261415 CYB561D2O14569 222 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 DPH6Q7L8W6 267 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 DNAAF5Q86Y56 855 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 C7orf61Q8IZ16 206 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 PTPRN2Q92932 1015 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 FAM136AQ96C01 138 aa19.73■□□□□ 0.75
COL4A3BP-201ENST00000261415 SENP8Q96LD8 212 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms