RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 GSTM2P28161 218 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 RCVRNP35243 200 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 CDKN1CP49918 316 aaPredicted RBP11.16□□□□□ -0.62
GCM1-201ENST00000259803 IL1RL1Q01638 556 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 PTH1RQ03431 593 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
GCM1-201ENST00000259803 PICALMQ13492 652 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 MXD4Q14582 209 aaPredicted RBP11.16□□□□□ -0.62
GCM1-201ENST00000259803 MAPK6Q16659 721 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 UGP2Q16851 508 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 IYDQ6PHW0 289 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 DTHD1Q6ZMT9 781 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 ZNF619Q8N2I2 560 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 DNAAF3Q8N9W5 541 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 GIPC3Q8TF64 312 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
GCM1-201ENST00000259803 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
GCM1-201ENST00000259803 ALG13Q9NP73 1137 aaKnown RBP11.16□□□□□ -0.62
GCM1-201ENST00000259803 ADGRE2Q9UHX3 823 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
GCM1-201ENST00000259803 C5orf60A6NFR6 353 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 SYN1P17600 705 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 PKLRP30613 574 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 NUDT1P36639 197 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 LONP1P36776 959 aaKnown RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 NEK3P51956 506 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 FANCCQ00597 558 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 EXOSC10Q01780 885 aaKnown RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
GCM1-201ENST00000259803 MDH1BQ5I0G3 518 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 AAGABQ6PD74 315 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 FAM47EQ6ZV65 393 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 TTC9Q92623 222 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 NMD3Q96D46 503 aaKnown RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
GCM1-201ENST00000259803 NMRK2Q9NPI5 230 aa11.15□□□□□ -0.62
GCM1-201ENST00000259803 HEATR9A2RTY3 570 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 PSMD11O00231 422 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 GATCO43716 136 aaKnown RBP11.15□□□□□ -0.63
GCM1-201ENST00000259803 APEHP13798 732 aaKnown RBP11.15□□□□□ -0.63
GCM1-201ENST00000259803 CCNA2P20248 432 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 BTDP43251 543 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 CRKP46108 304 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 CUL2Q13617 745 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 APOBEC3HQ6NTF7 200 aaKnown RBP11.15□□□□□ -0.63
GCM1-201ENST00000259803 CLEC2AQ6UVW9 174 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 EEPD1Q7L9B9 569 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 TBC1D1Q86TI0 1168 aaPredicted RBP11.15□□□□□ -0.63
GCM1-201ENST00000259803 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 C12orf50Q8NA57 414 aaPredicted RBP11.15□□□□□ -0.63
GCM1-201ENST00000259803 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.63
GCM1-201ENST00000259803 MED15Q96RN5 788 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 SLC35C2Q9NQQ7 365 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 ADAM22Q9P0K1 906 aa11.15□□□□□ -0.63
GCM1-201ENST00000259803 ZSCAN5CA6NGD5 496 aaPredicted RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 GPAA1O43292 621 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 PALMO75781 387 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 CCNDBP1O95273 360 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 ETS2P15036 469 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 SHMT1P34896 483 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 NKX2-5P52952 324 aaPredicted RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 GCNT1Q02742 428 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 DUSP4Q13115 394 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 TRIM14Q14142 442 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 SLC39A14Q15043 492 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 MINDY4Q4G0A6 757 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 HERC4Q5GLZ8 1057 aaPredicted RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 INTS11Q5TA45 600 aaKnown RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 MARK2Q7KZI7 788 aaKnown RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 UCMAQ8WVF2 138 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 TNKS2Q9H2K2 1166 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 POTECB2RU33 542 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 PRSS44E7EML9 344 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 SHOXO15266 292 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 ALBP02768 609 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 GFAPP14136 432 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 PCSK2P16519 638 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 CAPN3P20807 821 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 CDK7P50613 346 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 TTF1Q15361 905 aaPredicted RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 LSM12Q3MHD2 195 aaKnown RBP11.14□□□□□ -0.63
GCM1-201ENST00000259803 HECTD3Q5T447 861 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 NIPAL1Q6NVV3 410 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 KRT74Q7RTS7 529 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 EPHX4Q8IUS5 362 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 WDR49Q8IV35 697 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 TTC8Q8TAM2 541 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 SYNDIG1Q9H7V2 258 aa11.14□□□□□ -0.63
GCM1-201ENST00000259803 SYTL2Q9HCH5 934 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms