RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 FBXW8Q8N3Y1 598 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 ZNF784Q8NCA9 323 aaPredicted RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 KCNK16Q96T55 309 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 MPHOSPH6Q99547 160 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 OXCT2Q9BYC2 517 aaPredicted RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 DHX33Q9H6R0 707 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 GINM1Q9NU53 330 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 THAP1Q9NVV9 213 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 DDX56Q9NY93 547 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 RSL24D1Q9UHA3 163 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 SRP68Q9UHB9 627 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 FAF1Q9UNN5 650 aaPredicted RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 hCG_1818297A0A087WSY0 165 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 KRT37O76014 449 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 STK10O94804 968 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 KRT1P04264 644 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 ATF7P17544 494 aaPredicted RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 MLH1P40692 756 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 MYBPC1Q00872 1141 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 CHI3L2Q15782 390 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 AOC3Q16853 763 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 SLC26A11Q86WA9 606 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 PHF13Q86YI8 300 aaPredicted RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 CLEC10AQ8IUN9 316 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 ADCY4Q8NFM4 1077 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 FEZF2Q8TBJ5 459 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 PRPF31Q8WWY3 499 aaKnown RBP21.23■□□□□ 0.99
RARA-201ENST00000254066 CMTM5Q96DZ9 223 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 TMEM121Q9BTD3 319 aa21.23■□□□□ 0.99
RARA-201ENST00000254066 ZBTB39O15060 712 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 CRTAMO95727 393 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 SNRPAP09012 282 aaKnown RBP21.22■□□□□ 0.99
RARA-201ENST00000254066 SRGAP2CP0DJJ0 459 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 SRGAP2BP0DMP2 458 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 CDK9P50750 372 aaKnown RBP21.22■□□□□ 0.99
RARA-201ENST00000254066 UBAP2LQ14157 1087 aaKnown RBP21.22■□□□□ 0.99
RARA-201ENST00000254066 KBTBD12Q3ZCT8 623 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 LSM14AQ8ND56 463 aaKnown RBP21.22■□□□□ 0.99
RARA-201ENST00000254066 DHRS1Q96LJ7 313 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 WDR11Q9BZH6 1224 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 ARHGEF38Q9NXL2 777 aa21.22■□□□□ 0.99
RARA-201ENST00000254066 A0A0B4J269 797 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 TLR3O15455 904 aaKnown RBP21.21■□□□□ 0.99
RARA-201ENST00000254066 IFNB1P01574 187 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 POLR2MP0CAP2 368 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 PRDX6P30041 224 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 GTF2BQ00403 316 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 C1QBPQ07021 282 aaKnown RBP21.21■□□□□ 0.99
RARA-201ENST00000254066 TUBB3Q13509 450 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 PARVAQ9NVD7 372 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 USTQ9Y2C2 406 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 AP4B1Q9Y6B7 739 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 SQORQ9Y6N5 450 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 MEI4A8MW99 385 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 ADRB2P07550 413 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 TM4SF1P30408 202 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 L1CAMP32004 1257 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 GJC1P36383 396 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 EPHB1P54762 984 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 PSMC1P62191 440 aaKnown RBP21.21■□□□□ 0.99
RARA-201ENST00000254066 BBS9Q3SYG4 887 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 ANKRD22Q5VYY1 191 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 ZFP1Q6P2D0 407 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 HSPBAP1Q96EW2 488 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 SERPINB13Q9UIV8 391 aa21.21■□□□□ 0.99
RARA-201ENST00000254066 TCRBV9S1A1TA0A576 114 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 CAPN15O75808 1086 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 MTTPP55157 894 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 NUP107P57740 925 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 GSTM4Q03013 218 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 STX3Q13277 289 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 RALGPS1Q5JS13 557 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 CDHR3Q6ZTQ4 885 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 FBXO11Q86XK2 927 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 TICAM1Q8IUC6 712 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 CYP2W1Q8TAV3 490 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 NACA2Q9H009 215 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 ZNRF3Q9ULT6 936 aa21.2■□□□□ 0.99
RARA-201ENST00000254066 APOBEC2Q9Y235 224 aaKnown RBP21.2■□□□□ 0.99
RARA-201ENST00000254066 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.2■□□□□ 0.98
RARA-201ENST00000254066 PI4K2BG5E9Z4 385 aa21.2■□□□□ 0.98
RARA-201ENST00000254066 MAGEB3O15480 346 aa21.2■□□□□ 0.98
RARA-201ENST00000254066 SNRNP35Q16560 246 aaKnown RBP21.2■□□□□ 0.98
RARA-201ENST00000254066 DQX1Q8TE96 717 aaKnown RBP21.2■□□□□ 0.98
RARA-201ENST00000254066 KCNN1Q92952 543 aa21.2■□□□□ 0.98
RARA-201ENST00000254066 TISP43B9A030 160 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 PROCP04070 461 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 CAPNS1P04632 268 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 ATP6V1B1P15313 513 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 ZNF23P17027 643 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 SYCP2LQ5T4T6 812 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 POTEHQ6S545 545 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 CCDC17Q96LX7 622 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 PRPF18Q99633 342 aaKnown RBP21.19■□□□□ 0.98
RARA-201ENST00000254066 BCAP29Q9UHQ4 241 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 TMED5Q9Y3A6 229 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 ITM2AO43736 263 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 BPGMP07738 259 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 TAS1R2Q8TE23 839 aa21.19■□□□□ 0.98
RARA-201ENST00000254066 SPDYE16A6NNV3 312 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms