RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 NFIL3Q16649 462 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 HYIQ5T013 277 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 GPC2Q8N158 579 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 MAGEB18Q96M61 343 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 ITGB1BP2Q9UKP3 347 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 REXO2Q9Y3B8 237 aaKnown RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 FMN2Q9NZ56 1722 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 MAP2K7O14733 419 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 ESRRBO95718 433 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 GLRA2P23416 452 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 AADACL2Q6P093 401 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 LINC00523Q86TU6 105 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 SGF29Q96ES7 293 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CDY2AQ9Y6F7 541 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 VGLL4Q14135 290 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 TMA16Q96EY4 203 aaKnown RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 NSL1Q96IY1 281 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 SLC24A2Q9UI40 661 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 LSM7Q9UK45 103 aaKnown RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 DNALI1O14645 258 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 AIM2O14862 343 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CCNJLQ8IV13 435 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 SEPT8Q92599 483 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CEP19Q96LK0 163 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 NAT9Q9BTE0 207 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 MUC3BQ9H195 1237 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 PRRG1O14668 218 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 STRNO43815 780 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 AKAP5P24588 427 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ADORA2AP29274 412 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 BMT2Q1RMZ1 405 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 RNF180Q86T96 592 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 PRPF39Q86UA1 669 aaKnown RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 SLC26A11Q86WA9 606 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 TMEM139Q8IV31 216 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 DNAJB3Q8WWF6 145 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 FGFBP2Q9BYJ0 223 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ANGPT2O15123 496 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 MICAL2O94851 1124 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 CYP2F1P24903 491 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 TARSP26639 723 aaKnown RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 FCGRTP55899 365 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ZBTB41Q5SVQ8 909 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 RARS2Q5T160 578 aaKnown RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 MIB1Q86YT6 1006 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 FAM71AQ8IYT1 594 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 KCNK16Q96T55 309 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 VTA1Q9NP79 307 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 HEY2Q9UBP5 337 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 DNPEPQ9ULA0 475 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 CYBBP04839 570 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 IRF1P10914 325 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 DGKZQ13574 1117 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 NANOGNBQ7Z5D8 188 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 IRF2BP2Q7Z5L9 587 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 SHC3Q92529 594 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 CMTM5Q96DZ9 223 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 RPRD1AQ96P16 312 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 F8VP50 259 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 GLRA3O75311 464 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 APOA1P02647 267 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 TKTL1P51854 596 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 TWF1Q12792 350 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ITIH4Q14624 930 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 SLC27A1Q6PCB7 646 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ING2Q9H160 280 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
PCDHGA12-201ENST00000252085 JCHAINP01591 159 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 PAEPP09466 180 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 IFI35P80217 286 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 SREBF2Q12772 1141 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 RIOX2Q8IUF8 465 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 SHCBP1Q8NEM2 672 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 HASPINQ8TF76 798 aa13.13□□□□□ -0.31
PCDHGA12-201ENST00000252085 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms