RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 TMEM106CQ9BVX2 250 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 AAASQ9NRG9 546 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 ARHGAP28Q9P2N2 729 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 TCP11X1B4DZS4 312 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
SIN3B-201ENST00000248054 DUSP28Q4G0W2 176 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
SIN3B-201ENST00000248054 APBB2Q92870 758 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 BRD8Q9H0E9 1235 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 STARD7Q9NQZ5 370 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 CHMP2BQ9UQN3 213 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 DCDC2CA8MYV0 355 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 MGAT5BQ3V5L5 792 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 LRRC34Q8IZ02 419 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 FAM161BQ96MY7 647 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 KRT82Q9NSB4 513 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 COL20A1Q9P218 1284 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 FAM153BP0C7A2 387 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 KCNA3P22001 575 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 PTK7Q13308 1070 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 TRADDQ15628 312 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 FAM153CQ494X1 144 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 RARS2Q5T160 578 aaKnown RBP16.34■□□□□ 0.21
SIN3B-201ENST00000248054 ACBD5Q5T8D3 534 aaPredicted RBP16.34■□□□□ 0.21
SIN3B-201ENST00000248054 ICA1LQ8NDH6 482 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 SEPT5Q99719 369 aaPredicted RBP16.34■□□□□ 0.21
SIN3B-201ENST00000248054 FAM153AQ9UHL3 310 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 POLIQ9UNA4 740 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 A0A0B4J269 797 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 ATP9BO43861 1147 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 GLI1P08151 1106 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 ORC1Q13415 861 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 DGKZQ13574 1117 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 CHADLQ6NUI6 762 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 ZNF512Q96ME7 567 aaPredicted RBP16.33■□□□□ 0.21
SIN3B-201ENST00000248054 RHBDL2Q9NX52 303 aa16.33■□□□□ 0.21
SIN3B-201ENST00000248054 CARNS1A5YM72 827 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 PDE2AO00408 941 aaPredicted RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 CASP2P42575 452 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 TIGD7Q6NT04 549 aaPredicted RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 COPS5Q92905 334 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 SH3GL2Q99962 352 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 DHX33Q9H6R0 707 aaKnown RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 FARP1Q9Y4F1 1045 aaPredicted RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 AHCYL1O43865 530 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 EPHB2P29323 1055 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 AMHR2Q16671 573 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 ZNF280DQ6N043 979 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 RGMBQ6NW40 437 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 ATG4AQ8WYN0 398 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 LBHD1Q9BQE6 289 aaPredicted RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 DPYSL4O14531 572 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 SMIM10L2AP0DMW4 78 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 SMIM10L2BP0DMW5 78 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 EEF1B2P24534 225 aaKnown RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 EEF1DP29692 281 aaKnown RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 GRM5P41594 1212 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 ALDH7A1P49419 539 aaKnown RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 HARS2P49590 506 aaKnown RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 KPNA1P52294 538 aaPredicted RBP16.33■□□□□ 0.2
SIN3B-201ENST00000248054 C2CD6Q53TS8 623 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 OR6P1Q8NGX9 317 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 AGAP11Q8TF27 550 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 DCTN4Q9UJW0 460 aa16.33■□□□□ 0.2
SIN3B-201ENST00000248054 ZSCAN5CA6NGD5 496 aaPredicted RBP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 ATP4AP20648 1035 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 SLC6A3Q01959 620 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 ERMARDQ5T6L9 678 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 FBXO25Q8TCJ0 367 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 FAM118BQ9BPY3 351 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 DDX43Q9NXZ2 648 aaKnown RBP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 SLC24A2Q9UI40 661 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 MTO1Q9Y2Z2 717 aaKnown RBP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 SNCAIPQ9Y6H5 919 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 ARL2P36404 184 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 NR2C2P49116 596 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 CDK5RAP1Q96SZ6 601 aaKnown RBP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 GGA2Q9UJY4 613 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 PRG3Q9Y2Y8 225 aaPredicted RBP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 AGPSO00116 658 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 ALDH1A3P47895 512 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 INPP1P49441 399 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 ARHGDIAP52565 204 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 GEMP55040 296 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 AMPD2Q01433 879 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 FMO1Q01740 532 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 HIC1Q14526 733 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 UROC1Q96N76 676 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 SLC13A1Q9BZW2 595 aa16.32■□□□□ 0.2
SIN3B-201ENST00000248054 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
SIN3B-201ENST00000248054 SNX2O60749 519 aa16.31■□□□□ 0.2
SIN3B-201ENST00000248054 CSDE1O75534 798 aaKnown RBP16.31■□□□□ 0.2
SIN3B-201ENST00000248054 ASS1P00966 412 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms