RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 LVRNQ6Q4G3 990 aa27.41■■□□□ 1.98
RTN2-201ENST00000245923 SLCO1B3Q9NPD5 702 aa27.41■■□□□ 1.98
RTN2-201ENST00000245923 APOL1O14791 398 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 MDM4O15151 490 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 GABBR2O75899 941 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 GTF2A1P52655 376 aaPredicted RBP27.4■■□□□ 1.98
RTN2-201ENST00000245923 SNX16P57768 344 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 MTM1Q13496 603 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 RIPK1Q13546 671 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 SLC27A1Q6PCB7 646 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 UNC93AQ86WB7 457 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 ZDHHC17Q8IUH5 632 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 MORF4L1Q9UBU8 362 aa27.4■■□□□ 1.98
RTN2-201ENST00000245923 PDCD11Q14690 1871 aaKnown RBP27.4■■□□□ 1.98
RTN2-201ENST00000245923 ZNF487B1APH4 448 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 PAPSS1O43252 624 aaPredicted RBP27.39■■□□□ 1.98
RTN2-201ENST00000245923 SPAG6O75602 509 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 SKIV2L2P42285 1042 aaKnown RBP27.39■■□□□ 1.98
RTN2-201ENST00000245923 SCUBE3Q8IX30 993 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 PCDH19Q8TAB3 1148 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 FAF2Q96CS3 445 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 SNRNP25Q9BV90 132 aaKnown RBP27.39■■□□□ 1.98
RTN2-201ENST00000245923 FRMD8Q9BZ67 464 aaPredicted RBP27.39■■□□□ 1.98
RTN2-201ENST00000245923 FAM49BQ9NUQ9 324 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 GPATCH2LQ9NWQ4 482 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 HESX1Q9UBX0 185 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 TUBGCP4Q9UGJ1 667 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 BCLAF3A2AJT9 711 aaKnown RBP27.39■■□□□ 1.98
RTN2-201ENST00000245923 VGLL3A8MV65 326 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 PIAS1O75925 651 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 YARSP54577 528 aaKnown RBP27.39■■□□□ 1.98
RTN2-201ENST00000245923 BCAR1P56945 870 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 DGKDQ16760 1214 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 ARHGAP17Q68EM7 881 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 BANPQ8N9N5 519 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 ZNF670Q9BS34 389 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 USH1CQ9Y6N9 552 aa27.39■■□□□ 1.98
RTN2-201ENST00000245923 TM9SF1O15321 606 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 ATP6V1G2O95670 118 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 DPY19L2Q6NUT2 758 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 ASRGL1Q7L266 308 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 BEST2Q8NFU1 509 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 OR6J1Q8NGC5 347 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 ZNF75CPQ92670 426 aaPredicted RBP27.38■■□□□ 1.97
RTN2-201ENST00000245923 GCOM2Q9BZD3 368 aaPredicted RBP27.38■■□□□ 1.97
RTN2-201ENST00000245923 TCRBV9S1A1TA0A576 114 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 RRN3P2A6NIE6 340 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 KCNN4O15554 427 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 CCNB1P14635 433 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 DESP17661 470 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 KCNJ2P63252 427 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 KLHL29Q96CT2 875 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 EIF2AQ9BY44 585 aaKnown RBP27.38■■□□□ 1.97
RTN2-201ENST00000245923 PNPLA8Q9NP80 782 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 ARHGEF3Q9NR81 526 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 RAB6BQ9NRW1 208 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 SETD4Q9NVD3 440 aa27.38■■□□□ 1.97
RTN2-201ENST00000245923 KBTBD13C9JR72 458 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 GCLCP48506 637 aaPredicted RBP27.37■■□□□ 1.97
RTN2-201ENST00000245923 HDAC4P56524 1084 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 CA9Q16790 459 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 SLC44A1Q8WWI5 657 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 MAML3Q96JK9 1138 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 MS4A4AQ96JQ5 239 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 BTBD19C9JJ37 291 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 IGF2BP3O00425 579 aaKnown RBP eCLIP27.37■■□□□ 1.97
RTN2-201ENST00000245923 GPR32O75388 356 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 FGFR1P11362 822 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 MAGEA6P43360 314 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 CDC42EP1Q00587 391 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 ALKAL1Q6UXT8 129 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 CATSPER4Q7RTX7 472 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 ZNF276Q8N554 614 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 C18orf25Q96B23 403 aaPredicted RBP27.37■■□□□ 1.97
RTN2-201ENST00000245923 HEY1Q9Y5J3 304 aa27.37■■□□□ 1.97
RTN2-201ENST00000245923 RBL1P28749 1068 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 PTPN9P43378 593 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 ZNF200P98182 395 aaPredicted RBP27.36■■□□□ 1.97
RTN2-201ENST00000245923 DPP9Q86TI2 863 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 AGGF1Q8N302 714 aaeCLIP27.36■■□□□ 1.97
RTN2-201ENST00000245923 TCP10LQ8TDR4 215 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 CNTN3Q9P232 1028 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 IQANK1A0A1B0GTG1 560 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 ZBED1O96006 694 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 ADRA1DP25100 572 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 GRB14Q14449 540 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 SOWAHAQ2M3V2 549 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 C9orf57Q5W0N0 161 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 NOTUMQ6P988 496 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 C11orf84Q9BUA3 381 aaPredicted RBP27.36■■□□□ 1.97
RTN2-201ENST00000245923 B3GNT5Q9BYG0 378 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 ABHD16BQ9H3Z7 469 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 NOD2Q9HC29 1040 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 CYLDQ9NQC7 956 aa27.36■■□□□ 1.97
RTN2-201ENST00000245923 TMEM62Q0P6H9 643 aa27.35■■□□□ 1.97
RTN2-201ENST00000245923 KBTBD12Q3ZCT8 623 aa27.35■■□□□ 1.97
RTN2-201ENST00000245923 IQSEC1Q6DN90 963 aa27.35■■□□□ 1.97
RTN2-201ENST00000245923 GPR142Q7Z601 462 aa27.35■■□□□ 1.97
RTN2-201ENST00000245923 PNMA8AQ86V59 439 aaPredicted RBP27.35■■□□□ 1.97
RTN2-201ENST00000245923 OR6B3Q8NGW1 331 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms