RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CCDC103Q8IW40 242 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 APOL5Q9BWW9 433 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 DNPEPQ9ULA0 475 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 SHOC2Q9UQ13 582 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 C2CD2Q9Y426 696 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 CNTFP26441 200 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 SLC1A6P48664 564 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 KCTD19Q17RG1 926 aaPredicted RBP20.49■□□□□ 0.87
SOX4-201ENST00000244745 SPDYCQ5MJ68 293 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 AGAP9Q5VTM2 703 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 CCDC81Q6ZN84 652 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 SLFN11Q7Z7L1 901 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 JADE3Q92613 823 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 BRD8Q9H0E9 1235 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 GGA3Q9NZ52 723 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 TMX2Q9Y320 296 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 TNPO2O14787 897 aaKnown RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 TBL3Q12788 808 aaKnown RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 KBTBD12Q3ZCT8 623 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CASP10Q92851 521 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 USP13Q92995 863 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 DEFB129Q9H1M3 183 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 SLC38A7Q9NVC3 462 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 SLC30A1Q9Y6M5 507 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 SUPT7LO94864 414 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CYP2C9P11712 490 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CDH2P19022 906 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 DLG4P78352 724 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 ZRANB3Q5FWF4 1079 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CCNJLQ8IV13 435 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 ZNF75CPQ92670 426 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 CATSPER2Q96P56 530 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 APOL2Q9BQE5 337 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CNPY3Q9BT09 278 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 RIC8BQ9NVN3 520 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CPA3P15088 417 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 GCLCP48506 637 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 CLK1P49759 484 aaKnown RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 SAMD7Q7Z3H4 446 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 HORMAD1Q86X24 394 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 APOPT1Q96IL0 206 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 HIST1H2AGP0C0S8 130 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 HIST1H2ADP20671 130 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CYP2F1P24903 491 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 DENND1BQ6P3S1 775 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CCDC60Q8IWA6 550 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 DEFB107AQ8IZN7 70 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 HIST1H2AHQ96KK5 128 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 SEPT5Q99719 369 aaPredicted RBP20.48■□□□□ 0.87
SOX4-201ENST00000244745 HIST1H2AJQ99878 128 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 H2AFJQ9BTM1 129 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 LRRC40Q9H9A6 602 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 TISP43B9A030 160 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 FCHO1O14526 889 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 TADA2AO75478 443 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 FRMPD4Q14CM0 1322 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 LPCAT2Q7L5N7 544 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 CHST12Q9NRB3 414 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 LATS2Q9NRM7 1088 aa20.48■□□□□ 0.87
SOX4-201ENST00000244745 GAS2O43903 313 aaKnown RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 PGM5Q15124 567 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 DIS3LQ8TF46 1054 aaKnown RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 LZICQ8WZA0 190 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 SCN3BQ9NY72 215 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 TIMM44O43615 452 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 SERPINI2O75830 405 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 CALCAP01258 141 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 PYGLP06737 847 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 FAM58BPP0C7Q3 252 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 RPA3P35244 121 aaPredicted RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 NNMTP40261 264 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 PLEKHA7Q6IQ23 1121 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 COLGALT1Q8NBJ5 622 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.47■□□□□ 0.87
SOX4-201ENST00000244745 KBTBD13C9JR72 458 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 SLC25A27O95847 323 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 CHRM3P20309 590 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 GEMP55040 296 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 TCHHL1Q5QJ38 904 aaPredicted RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 N4BP2L1Q5TBK1 243 aaPredicted RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 MFSD14CQ5VZR4 134 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 PTRHD1Q6GMV3 140 aaKnown RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 MFSD7Q6UXD7 560 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 TERB1Q8NA31 727 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 LNX1Q8TBB1 728 aaPredicted RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 DDX50Q9BQ39 737 aaKnown RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 USP20Q9Y2K6 914 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 TULP2O00295 520 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 CLASP2O75122 1294 aaKnown RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 SMNDC1O75940 238 aaKnown RBP eCLIP20.47■□□□□ 0.87
SOX4-201ENST00000244745 VTNP04004 478 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
SOX4-201ENST00000244745 ARMCX1Q9P291 453 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 PNPLA4P41247 253 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 PLIN5Q00G26 463 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 SYTL3Q4VX76 610 aa20.47■□□□□ 0.87
SOX4-201ENST00000244745 OTULINQ96BN8 352 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms