RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 PTPRDP23468 1912 aa18.77■□□□□ 0.59
KLHDC3-201ENST00000244670 hCG_1818297A0A087WSY0 165 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 C3orf70A6NLC5 250 aaPredicted RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 NT5C1B-RDH14C9J2C7 533 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 CDKN2BP42772 138 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 SLC11A1P49279 550 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 MRPS5P82675 430 aaKnown RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 B3GALT6Q96L58 329 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 ULBP1Q9BZM6 244 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 DCLK3Q9C098 648 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 GRHL1Q9NZI5 618 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 ADAM28Q9UKQ2 775 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 PRPSAP2O60256 369 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 PARNO95453 639 aaKnown RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 KDELR1P24390 212 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 RPL21P46778 160 aaKnown RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 ATXN1P54253 815 aaKnown RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 TFDP3Q5H9I0 405 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 EFHC1Q5JVL4 640 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 ALS2CLQ60I27 953 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 ZDHHC24Q6UX98 284 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 CYP4V2Q6ZWL3 525 aaPredicted RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 CEP57Q86XR8 500 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 IQCKQ8N0W5 287 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 DEFB106AQ8N104 65 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 KCTD6Q8NC69 237 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 SLCO2A1Q92959 643 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 HAUS1Q96CS2 278 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 RUNDC3BQ96NL0 473 aa18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 PRDM5Q9NQX1 630 aaPredicted RBP18.76■□□□□ 0.59
KLHDC3-201ENST00000244670 HOXA2O43364 376 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 TRAPPC3O43617 180 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 HSF2BPO75031 334 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 RNF40O75150 1001 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 SCNN1AP37088 669 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 DRG2P55039 364 aaKnown RBP18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 UAP1Q16222 522 aaPredicted RBP18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 HFE2Q6ZVN8 426 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 VWCEQ96DN2 955 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 SH3GL2Q99962 352 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 GPATCH2LQ9NWQ4 482 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 MARCH5Q9NX47 278 aa18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.75■□□□□ 0.59
KLHDC3-201ENST00000244670 HHLA1C9JL84 531 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 ECEL1O95672 775 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 ALDH2P05091 517 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 USP17L7P0C7H9 530 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 PTPN9P43378 593 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 HDAC4P56524 1084 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 COPS2P61201 443 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 DYNLT1P63172 113 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 SLC39A12Q504Y0 691 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 FAM171A1Q5VUB5 890 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 TMC3Q7Z5M5 1100 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 EXOC4Q96A65 974 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 TBCBQ99426 244 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 GPR62Q9BZJ7 368 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 TJP3O95049 919 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 DESP17661 470 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 ITGB8P26012 769 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 HSD17B3P37058 310 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 IKBKEQ14164 716 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 VARS2Q5ST30 1063 aaKnown RBP18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 CFAP58Q5T655 872 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 TMEM173Q86WV6 379 aaPredicted RBP18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 SPATA2LQ8IUW3 424 aaPredicted RBP18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 ANKLE1Q8NAG6 615 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 CCDC114Q96M63 670 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 FMO2Q99518 471 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 DDX23Q9BUQ8 820 aaKnown RBP18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 CALN1Q9BXU9 219 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 MRPL9Q9BYD2 267 aaKnown RBP18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 CSNK1G1Q9HCP0 422 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 CALCOCO1Q9P1Z2 691 aa18.74■□□□□ 0.59
KLHDC3-201ENST00000244670 SYNJ2BP-COX16A0A087WUM0 186 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 DAB1O75553 588 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 PTPN7P35236 360 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 MATKP42679 507 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 SULT1E1P49888 294 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 CDH6P55285 790 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 DAOAP59103 153 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 YWHAZP63104 245 aaKnown RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 PITX1P78337 314 aaPredicted RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 KRT17Q04695 432 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 MAPRE1Q15691 268 aaKnown RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 DCAF6Q58WW2 860 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 ZC3H12AQ5D1E8 599 aaKnown RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 RAB41Q5JT25 222 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 TMCO2Q7Z6W1 182 aaPredicted RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 CMASQ8NFW8 434 aaPredicted RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 FBXO25Q8TCJ0 367 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 C11orf84Q9BUA3 381 aaPredicted RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 COLEC11Q9BWP8 271 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 DMAP1Q9NPF5 467 aaPredicted RBP18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 COX16Q9P0S2 106 aa18.73■□□□□ 0.59
KLHDC3-201ENST00000244670 YJEFN3A6XGL0 299 aa18.72■□□□□ 0.59
KLHDC3-201ENST00000244670 E7ENQ6 273 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms