RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LNX1Q8TBB1 728 aaPredicted RBP8.41□□□□□ -1.06
CXCR4-201ENST00000241393 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
CXCR4-201ENST00000241393 CASKIN2Q8WXE0 1202 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 CTNNBL1Q8WYA6 563 aaPredicted RBP8.41□□□□□ -1.06
CXCR4-201ENST00000241393 SEC14L1Q92503 715 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 ZIM3Q96PE6 472 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 ACCSQ96QU6 501 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 ORAI3Q9BRQ5 295 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 CAPS2Q9BXY5 557 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 AP5M1Q9H0R1 490 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 CARD9Q9H257 536 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 IPPKQ9H8X2 491 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 AMFRQ9UKV5 643 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 NFU1Q9UMS0 254 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 NOC2LQ9Y3T9 749 aaKnown RBP8.41□□□□□ -1.06
CXCR4-201ENST00000241393 RWDD3Q9Y3V2 267 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 UBIAD1Q9Y5Z9 338 aa8.41□□□□□ -1.06
CXCR4-201ENST00000241393 CLRN2A0PK11 232 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 HMGB1P1B2RPK0 211 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 WDR46O15213 610 aaKnown RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 ZEB2O60315 1214 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 HSPA6P17066 643 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 ITGB5P18084 799 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 IRAK1P51617 712 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 NFKB2Q00653 900 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 SLC20A2Q08357 652 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 DHCR24Q15392 516 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 CBWD6Q4V339 395 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 CBWD3Q5JTY5 395 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 CBWD5Q5RIA9 395 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 BICRALQ6AI39 1079 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 SYCP3Q8IZU3 236 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 TTLL6Q8N841 843 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 PRPF38AQ8NAV1 312 aaKnown RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 RDM1Q8NG50 284 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 LMO3Q8TAP4 145 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 MORC4Q8TE76 937 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 ZBED3Q96IU2 234 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 CCDC43Q96MW1 224 aaKnown RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 GPR88Q9GZN0 384 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 TBC1D22BQ9NU19 505 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 WRAP73Q9P2S5 460 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 PGAP2Q9UHJ9 254 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 CCPG1Q9ULG6 757 aa8.4□□□□□ -1.06
CXCR4-201ENST00000241393 PACSIN2Q9UNF0 486 aaPredicted RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.06
CXCR4-201ENST00000241393 TMCO5BA8MYB1 307 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 MIF4GDA9UHW6 222 aaKnown RBP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 K7ENM7 598 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 EIF3HO15372 352 aaKnown RBP eCLIP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 KPNA6O60684 536 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 TNFAIP3P21580 790 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 QARSP47897 775 aaKnown RBP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 RARRES1P49788 294 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 CYP2J2P51589 502 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 GTF2BQ00403 316 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 TTMPQ5BVD1 217 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 DNAJC21Q5F1R6 531 aaKnown RBP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 C11orf63Q6NUN7 778 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 XRRA1Q6P2D8 792 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 GJB7Q6PEY0 223 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 KDM7AQ6ZMT4 941 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 DAAM2Q86T65 1068 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 RNF180Q86T96 592 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 C4orf19Q8IY42 314 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 EFCAB13Q8IY85 973 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 XXYLT1Q8NBI6 393 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 NETO2Q8NC67 525 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 ABHD4Q8TB40 342 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 CLEC4DQ8WXI8 215 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 IFT81Q8WYA0 676 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 DPF3Q92784 378 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 BCAS3Q9H6U6 928 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 AGO4Q9HCK5 861 aaKnown RBP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 FAM114A2Q9NRY5 505 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 KCNH7Q9NS40 1196 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 ANKEF1Q9NU02 776 aa8.4□□□□□ -1.07
CXCR4-201ENST00000241393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 RRP15Q9Y3B9 282 aaKnown RBP8.4□□□□□ -1.07
CXCR4-201ENST00000241393 SMCHD1A6NHR9 2005 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 MYO1CO00159 1063 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 BRINP1O60477 761 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 BUB1BO60566 1050 aaPredicted RBP8.39□□□□□ -1.07
CXCR4-201ENST00000241393 MTA2O94776 668 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 ECHS1P30084 290 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 SFNP31947 248 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 DNA2P51530 1060 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 VAMP7P51809 220 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 JAK3P52333 1124 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 ZNF460Q14592 562 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 PLS1Q14651 629 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 COG2Q14746 738 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 FAM153CQ494X1 144 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 EPC2Q52LR7 807 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 NLRX1Q86UT6 975 aa8.39□□□□□ -1.07
CXCR4-201ENST00000241393 KLHL7Q8IXQ5 586 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms