RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TJP3O95049 919 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 DESP17661 470 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 KCNJ1P48048 391 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 ARSEP51690 589 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 CCNG2Q16589 344 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 MAP9Q49MG5 647 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 BOLA3Q53S33 107 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 KAZNQ674X7 775 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 HFE2Q6ZVN8 426 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 CEP57Q86XR8 500 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 JAMLQ86YT9 394 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 SPATA2LQ8IUW3 424 aaPredicted RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 AENQ8WTP8 325 aaKnown RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 BCL7CQ8WUZ0 217 aaPredicted RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 HSPH1Q92598 858 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 TOP1MTQ969P6 601 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 NT5C3BQ969T7 300 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 RUNDC3BQ96NL0 473 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 SLC2A13Q96QE2 648 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 TRIM51Q9BSJ1 452 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 FUT8Q9BYC5 575 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 PRDM5Q9NQX1 630 aaPredicted RBP15.91■□□□□ 0.14
HDHD3-201ENST00000238379 HOMER3Q9NSC5 361 aa15.91■□□□□ 0.14
HDHD3-201ENST00000238379 PTPRDP23468 1912 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 YJEFN3A6XGL0 299 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 E7ENQ6 273 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 ZBED1O96006 694 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 FYNP06241 537 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 CD48P09326 243 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 USP17L7P0C7H9 530 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 NOS2P35228 1153 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 SLC25A52Q3SY17 297 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 SLC39A12Q504Y0 691 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 PM20D1Q6GTS8 502 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 SCYL2Q6P3W7 929 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 STRADAQ7RTN6 431 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 BHLHA9Q7RTU4 235 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 DCP1BQ8IZD4 617 aaKnown RBP15.9■□□□□ 0.14
HDHD3-201ENST00000238379 EIF1ADQ8N9N8 165 aaKnown RBP15.9■□□□□ 0.14
HDHD3-201ENST00000238379 KCTD6Q8NC69 237 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 TEKT4Q8WW24 435 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 SLCO2A1Q92959 643 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 B3GALT6Q96L58 329 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 TBCBQ99426 244 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 POPDC2Q9HBU9 364 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 CALCOCO1Q9P1Z2 691 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
HDHD3-201ENST00000238379 EFEMP2O95967 443 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 RAG1P15918 1043 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 CYP2F1P24903 491 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ELAVL2Q12926 359 aaKnown RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 NFE2Q16621 373 aaPredicted RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 CTXN3Q4LDR2 81 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 DCAF6Q58WW2 860 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 OTUD1Q5VV17 481 aaPredicted RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 SYPL2Q5VXT5 272 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 MFSD5Q6N075 450 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 BNIPLQ7Z465 357 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 CCDC105Q8IYK2 499 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 SCML4Q8N228 414 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 IFT81Q8WYA0 676 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 NPY6RQ99463 290 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ERP44Q9BS26 406 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 RAB17Q9H0T7 212 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 CWH43Q9H720 699 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 NFU1Q9UMS0 254 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 UTP11Q9Y3A2 253 aaKnown RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 USP3Q9Y6I4 520 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 LTBP2Q14767 1821 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 OR6C75A6NL08 312 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ATP8B1O43520 1251 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 SASH3O75995 380 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ALDH7A1P49419 539 aaKnown RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ATXN1P54253 815 aaKnown RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 SNX1Q13596 522 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 CUL1Q13616 776 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 DUPD1Q68J44 220 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ZNF280DQ6N043 979 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 TAS1R1Q7RTX1 841 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 IRGQQ8WZA9 623 aa15.89■□□□□ 0.13
HDHD3-201ENST00000238379 ZNF689Q96CS4 500 aaPredicted RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 FUBP3Q96I24 572 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 SNRNP25Q9BV90 132 aaKnown RBP15.89■□□□□ 0.13
HDHD3-201ENST00000238379 TNFRSF10BO14763 440 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 MDM4O15151 490 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 DAPK3O43293 454 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 TBC1D4O60343 1298 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 ECHS1P30084 290 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 SULT1E1P49888 294 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 CDH6P55285 790 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 DEFB103AP81534 67 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 ZC3H12AQ5D1E8 599 aaKnown RBP15.88■□□□□ 0.13
HDHD3-201ENST00000238379 RTP2Q5QGT7 225 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 BBS12Q6ZW61 710 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 TMEM199Q8N511 208 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 FAM118BQ9BPY3 351 aa15.88■□□□□ 0.13
HDHD3-201ENST00000238379 ABI2Q9NYB9 513 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms