RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 PRIM2P49643 509 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 PEX5P50542 639 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 RAD9BQ6WBX8 426 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 BNC2Q6ZN30 1099 aaPredicted RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 FBXO44Q9H4M3 255 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 TMCC3Q9ULS5 477 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 ZNF711Q9Y462 761 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 A0A087X1B8 175 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 TRIM49D1C9J1S8 452 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 CYB561D2O14569 222 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 SEC24DO94855 1032 aaPredicted RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 RPN2P04844 631 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 PGAM1P18669 254 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 CYP2A7P20853 494 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 CRABP2P29373 138 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 PIK3CGP48736 1102 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 PLOD1Q02809 727 aaPredicted RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 FBXL16Q8N461 479 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 CERKQ8TCT0 537 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 ATG4CQ96DT6 458 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 TMEM176AQ96HP8 235 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 ZNF668Q96K58 619 aaPredicted RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 THTPAQ9BU02 230 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 ZCCHC2Q9C0B9 1178 aaKnown RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 ASCC2Q9H1I8 757 aaPredicted RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 TMEM245Q9H330 911 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 POLG2Q9UHN1 485 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 TRHDEQ9UKU6 1024 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
CPS1-201ENST00000233072 PRG3Q9Y2Y8 225 aaPredicted RBP7.45□□□□□ -1.22
CPS1-201ENST00000233072 RIMS1Q86UR5 1692 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 DYTNA2CJ06 578 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 GHRP10912 638 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 RARGP13631 454 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 LRRC74AQ0VAA2 488 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 PAPD7Q5XG87 772 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 ERAP2Q6P179 960 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 KDELC2Q7Z4H8 507 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 TUBGCP3Q96CW5 907 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 CLPBQ9H078 707 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 ALG13Q9NP73 1137 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 DMAP1Q9NPF5 467 aaPredicted RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 MAN1C1Q9NR34 630 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 EVA1BQ9NVM1 165 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 RABGEF1Q9UJ41 708 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 PHTF1Q9UMS5 762 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 A0A087WZ62 844 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 TRIM66O15016 1216 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 FKBP6O75344 327 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 RHOCP08134 193 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 CYP11B1P15538 503 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 CYP2B6P20813 491 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 EPHB2P29323 1055 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 BACE1P56817 501 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 FOXD4Q12950 439 aaPredicted RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 PCBP1Q15365 356 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPS1-201ENST00000233072 PPP4R4Q6NUP7 873 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 TMEM154Q6P9G4 183 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 SPIRE2Q8WWL2 714 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 CASKIN2Q8WXE0 1202 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 POP5Q969H6 163 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 C9orf72Q96LT7 481 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 AGBL1Q96MI9 1066 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 THAP2Q9H0W7 228 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 DNPEPQ9ULA0 475 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 RUVBL2Q9Y230 463 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 MROH7Q68CQ1 1323 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 GLP2RO95838 553 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 PAEPP09466 180 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 TGFB3P10600 412 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 SERPINB1P30740 379 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 RAB14P61106 215 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 GIT2Q14161 759 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 SKIV2LQ15477 1246 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 SEL1L3Q68CR1 1132 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 SLC26A11Q86WA9 606 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 FBXO36Q8NEA4 188 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 TRIM8Q9BZR9 551 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 PCDH9Q9HC56 1237 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 THG1LQ9NWX6 298 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 COMMD8Q9NX08 183 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 DDIT4Q9NX09 232 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 LNPEPQ9UIQ6 1025 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 PLAGL2Q9UPG8 496 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 TMX2Q9Y320 296 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 FAM205CA6NFA0 338 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 CELF2O95319 508 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 IL1R1P14778 569 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 THPOP40225 353 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 RPS6P62753 249 aaKnown RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 ACTN3Q08043 901 aaPredicted RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 TRIP10Q15642 601 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 NFE2Q16621 373 aaPredicted RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 TTC33Q6PID6 262 aaPredicted RBP7.44□□□□□ -1.22
CPS1-201ENST00000233072 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 GPR141Q7Z602 305 aa7.44□□□□□ -1.22
CPS1-201ENST00000233072 HS6ST3Q8IZP7 471 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms