RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ANKRD20A1Q5TYW2 823 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ANKRD20A3Q5VUR7 823 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZNF280BQ86YH2 543 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 FEZF2Q8TBJ5 459 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZNF483Q8TF39 744 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 B3GNT5Q9BYG0 378 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 SLITRK6Q9H5Y7 841 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ATP2A2P16615 1042 aaKnown RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 MSH2P43246 934 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 CENPCQ03188 943 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 MGAT3Q09327 533 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 TIGD5Q53EQ6 642 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 TMCO2Q7Z6W1 182 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 LONP2Q86WA8 852 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 FAM126BQ8IXS8 530 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 SIX6OS1Q8N1H7 587 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 STRIP2Q9ULQ0 834 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 SLC12A4Q9UP95 1085 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 USP15Q9Y4E8 981 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 WDR81Q562E7 1941 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 O00370 1275 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SMIM24O75264 130 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SUN1O94901 812 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 ACRP10323 421 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 TARSP26639 723 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 STX2P32856 288 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 TUSC3Q13454 348 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 MAMLD1Q13495 774 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 CNGA2Q16280 664 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 KCNT1Q5JUK3 1230 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 AP1ARQ63HQ0 302 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 FBXO46Q6PJ61 603 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 C1orf54Q8WWF1 131 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 TLCD1Q96CP7 247 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PGLYRP2Q96PD5 576 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 MTRF1LQ9UGC7 380 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 A0A0A6YYK5 440 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 LRRD1A4D1F6 860 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PIRO00625 290 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SNX3O60493 162 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 NBNO60934 754 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 ODC1P11926 461 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PDGFRAP16234 1089 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 EIF3BP55884 814 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 RWDD2BP57060 319 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 DYNLT1P63172 113 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 POU5F1Q01860 360 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZBTB6Q15916 424 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PRUNE1Q86TP1 453 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 FITM2Q8N6M3 262 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 B3GALT6Q96L58 329 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SYT15Q9BQS2 421 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 UBN1Q9NPG3 1134 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 ASIC3Q9UHC3 531 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 F8VP50 259 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 SPAG7O75391 227 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 CYP1A1P04798 512 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 MMP8P22894 467 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 CALRP27797 417 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 RFC1P35251 1148 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 COPS2P61201 443 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 TSPY1Q01534 308 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 OVOS1Q6IE37 1185 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 OTOP2Q7RTS6 562 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 HSPH1Q92598 858 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 HAUS1Q96CS2 278 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 CALR3Q96L12 384 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PPP1R10Q96QC0 940 aaKnown RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 NKX1-2Q9UD57 310 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 RASAL2Q9UJF2 1139 aa12.22□□□□□ -0.45
TNFAIP1-201ENST00000226225 PPFIA2O75334 1257 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 ALDH2P05091 517 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 PTPN1P18031 435 aaKnown RBP12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 MMP13P45452 471 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 SNX16P57768 344 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 GRIK3Q13003 919 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 ALKAL1Q6UXT8 129 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 RFX8Q6ZV50 586 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 RTN4RL1Q86UN2 441 aaPredicted RBP12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 C3orf58Q8NDZ4 430 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 NDRG1Q92597 394 aaKnown RBP12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 TGS1Q96RS0 853 aaKnown RBP12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 CALN1Q9BXU9 219 aa12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 ABI2Q9NYB9 513 aaPredicted RBP12.21□□□□□ -0.45
TNFAIP1-201ENST00000226225 DNAJB4Q9UDY4 337 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms