RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ANKLE1Q8NAG6 615 aa22.89■■□□□ 1.25
SMARCD2-201ENST00000225742 C10orf82Q8WW14 230 aa22.89■■□□□ 1.25
SMARCD2-201ENST00000225742 MYLK2Q9H1R3 596 aa22.89■■□□□ 1.25
SMARCD2-201ENST00000225742 TUT1Q9H6E5 874 aaKnown RBP22.89■■□□□ 1.25
SMARCD2-201ENST00000225742 PLXNB2O15031 1838 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 TRDMT1O14717 391 aaKnown RBP22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 STRNO43815 780 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 ZFXP17010 805 aaPredicted RBP22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 IL4RP24394 825 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC18A2Q05940 514 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 PCBP1Q15365 356 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 PARP6Q2NL67 630 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 C1orf228Q6PIY5 440 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 ARCQ7LC44 396 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 CHSY1Q86X52 802 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 CDKL3Q8IVW4 592 aaPredicted RBP22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 PQLC3Q8N755 202 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 MCUQ8NE86 351 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC35F5Q8WV83 523 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 INPP5DQ92835 1189 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 LRRC39Q96DD0 335 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 PPP1R16BQ96T49 567 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 DNAI2Q9GZS0 605 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 KLC2Q9H0B6 622 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 SLCO1B3Q9NPD5 702 aa22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.88■■□□□ 1.25
SMARCD2-201ENST00000225742 ECM2O94769 699 aaPredicted RBP22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 INHBAP08476 426 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 ZNF286BP0CG31 522 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 TROVE2P10155 538 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 PTPN9P43378 593 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC45A4Q5BKX6 768 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 PPP1R26Q5T8A7 1209 aaPredicted RBP22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 PMF1Q6P1K2 205 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 OTOAQ7RTW8 1153 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 AGGF1Q8N302 714 aaeCLIP22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 BEST2Q8NFU1 509 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 TCP10LQ8TDR4 215 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 FAM172AQ8WUF8 416 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 SPOCK2Q92563 424 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 KATNBL1Q9H079 304 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 LRMDAQ9H2I8 198 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 CHKBQ9Y259 395 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC45A1Q9Y2W3 748 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 TCRBV9S1A1TA0A576 114 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 RRN3P2A6NIE6 340 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 C2CD2LO14523 706 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 KCNN4O15554 427 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 WFS1O76024 890 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 ZBED1O96006 694 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 ADORA2AP29274 412 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 YWHAGP61981 247 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 PTK7Q13308 1070 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 GJC2Q5T442 439 aaPredicted RBP22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 TTC30AQ86WT1 665 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 IGDCC3Q8IVU1 814 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 APOPT1Q96IL0 206 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 SNX27Q96L92 541 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 TMEM237Q96Q45 408 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 YY1AP1Q9H869 796 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 RAB6BQ9NRW1 208 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 ZNF180Q9UJW8 692 aa22.87■■□□□ 1.25
SMARCD2-201ENST00000225742 KBTBD13C9JR72 458 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 HNRNPCL1O60812 293 aaKnown RBP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 DHRS4L1P0CG22 281 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 CYP2C8P10632 490 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 ADRA1DP25100 572 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 RGS7P49802 495 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 NEK3P51956 506 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 ZBTB6Q15916 424 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 CDO1Q16878 200 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 MARCH8Q5T0T0 291 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 LDLRAD1Q5T700 205 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 SCYL2Q6P3W7 929 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 CEP57Q86XR8 500 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 ZNF276Q8N554 614 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 TAB3Q8N5C8 712 aaPredicted RBP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 PCDH19Q8TAB3 1148 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 KHSRPQ92945 711 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 PIWIL1Q96J94 861 aaKnown RBP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 TSPAN18Q96SJ8 248 aa22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 MRPL45Q9BRJ2 306 aaKnown RBP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 SNRNP25Q9BV90 132 aaKnown RBP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 NGRNQ9NPE2 291 aaKnown RBP22.86■■□□□ 1.25
SMARCD2-201ENST00000225742 NPTXRO95502 500 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 IL1BP01584 269 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 KRT16P08779 473 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 CCND1P24385 295 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 RASSF2P50749 326 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 ATP11AP98196 1134 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 LGSNQ5TDP6 509 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 TTC39BQ5VTQ0 682 aaPredicted RBP22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC27A1Q6PCB7 646 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 ACOT1Q86TX2 421 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 SLC26A11Q86WA9 606 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 C12orf29Q8N999 325 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 ERP27Q96DN0 273 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 GCOM2Q9BZD3 368 aaPredicted RBP22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 MANSC1Q9H8J5 431 aa22.85■■□□□ 1.25
SMARCD2-201ENST00000225742 PRDM16Q9HAZ2 1276 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms