RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 NKD2Q969F2 451 aaPredicted RBP15.55■□□□□ 0.08
CCDC47-201ENST00000225726 CASD1Q96PB1 797 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 ASIC3Q9UHC3 531 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 DNPEPQ9ULA0 475 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 LRFN2Q9ULH4 789 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 HHLA1C9JL84 531 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 CST8O60676 142 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 CXCL10P02778 98 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 ATN1P54259 1190 aaPredicted RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 PLTPP55058 493 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 MTMR3Q13615 1198 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 KRT81Q14533 505 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 FAM149B1Q96BN6 582 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 TOX2Q96NM4 488 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 SLC2A13Q96QE2 648 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 SNRNP25Q9BV90 132 aaKnown RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 CALN1Q9BXU9 219 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 CNGB3Q9NQW8 809 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 HOXA2O43364 376 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 TRAPPC3O43617 180 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 TFE3P19532 575 aaPredicted RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 NDUFV1P49821 464 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 CACNA2D1P54289 1103 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 YWHAZP63104 245 aaKnown RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 YWHAHQ04917 246 aaPredicted RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 DPYSL3Q14195 570 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 TCTN1Q2MV58 587 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 SLC25A52Q3SY17 297 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 CFAP58Q5T655 872 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 ZNF365Q70YC5 407 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 TMC3Q7Z5M5 1100 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 DEFB106AQ8N104 65 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 SNF8Q96H20 258 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 MTRF1LQ9UGC7 380 aaKnown RBP15.54■□□□□ 0.08
CCDC47-201ENST00000225726 NLRC5Q86WI3 1866 aa15.54■□□□□ 0.08
CCDC47-201ENST00000225726 NOS2P35228 1153 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 CALCOCO2Q13137 446 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 FAM71BQ8TC56 605 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 FBXO25Q8TCJ0 367 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 KCNK16Q96T55 309 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ULBP1Q9BZM6 244 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 TMEM30AQ9NV96 361 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 TMLHEQ9NVH6 421 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 DNAJB4Q9UDY4 337 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ZNF487B1APH4 448 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 AGPSO00116 658 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ITGAVP06756 1048 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ATF2P15336 505 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ITIH2P19823 946 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 PTPRDP23468 1912 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 SULT1E1P49888 294 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 DAOAP59103 153 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 DYNLT1P63172 113 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 FAAP100Q0VG06 881 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 TFDP2Q14188 446 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 SCN5AQ14524 2016 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 OASLQ15646 514 aaKnown RBP15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ERMARDQ5T6L9 678 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 C1orf53Q5VUE5 145 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 SLC35B2Q8TB61 432 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 CCHCR1Q8TD31 782 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 NDRG1Q92597 394 aaKnown RBP15.53■□□□□ 0.08
CCDC47-201ENST00000225726 HAUS1Q96CS2 278 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 TMEM209Q96SK2 561 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 MAK16Q9BXY0 300 aaKnown RBP15.53■□□□□ 0.08
CCDC47-201ENST00000225726 PATJQ8NI35 1801 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 PPFIA2O75334 1257 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 GGCXP38435 758 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 SPDYCQ5MJ68 293 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 GSTA5Q7RTV2 222 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 GPRIN1Q7Z2K8 1008 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ALLCQ8N6M5 410 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 CCDC89Q8N998 374 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 SCLYQ96I15 445 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 RUFY1Q96T51 708 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ADAM33Q9BZ11 813 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 TXLNGYQ9BZA5 131 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 POPDC2Q9HBU9 364 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 PCDH18Q9HCL0 1135 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 DMAP1Q9NPF5 467 aaPredicted RBP15.53■□□□□ 0.08
CCDC47-201ENST00000225726 STAP1Q9ULZ2 295 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 ZNF148Q9UQR1 794 aa15.53■□□□□ 0.08
CCDC47-201ENST00000225726 APOC4-APOC2K7ER74 178 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 KRT14P02533 472 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 APOC2P02655 101 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 IVDP26440 423 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 CDR1P51861 262 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 OTUD4Q01804 1114 aaKnown RBP15.52■□□□□ 0.08
CCDC47-201ENST00000225726 LRRTM3Q86VH5 581 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 IQCKQ8N0W5 287 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 PIK3R5Q8WYR1 880 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 NT5C3BQ969T7 300 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 RHOBTB2Q9BYZ6 727 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 NRDE2Q9H7Z3 1164 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 PNPLA8Q9NP80 782 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.08
CCDC47-201ENST00000225726 PRG3Q9Y2Y8 225 aaPredicted RBP15.52■□□□□ 0.08
CCDC47-201ENST00000225726 TADA2AO75478 443 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms