RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ATG16L1Q676U5 607 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 TRIM55Q9BYV6 548 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 MRPL46Q9H2W6 279 aaKnown RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 GPATCH2LQ9NWQ4 482 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 E5RJQ4 531 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 NEMP1O14524 444 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 PPP1R37O75864 691 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 GJB6O95452 261 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 VSNL1P62760 191 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ROR1Q01973 937 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF235Q14590 738 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 C9orf57Q5W0N0 161 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 IL31Q6EBC2 164 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 GRAMD4Q6IC98 578 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 KDELC2Q7Z4H8 507 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 MCOLN2Q8IZK6 566 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 B3GALNT2Q8NCR0 500 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 CRYGNQ8WXF5 182 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 STAMBPL1Q96FJ0 436 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 AGAP3Q96P47 875 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 EPN3Q9H201 632 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 LY75O60449 1722 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 COL5A3P25940 1745 aaPredicted RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 S100BP04271 92 aaPredicted RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 EEF1DP29692 281 aaKnown RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 TUFMP49411 452 aaKnown RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 CORO7P57737 925 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 YWHAZP63104 245 aaKnown RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 SYCP2LQ5T4T6 812 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 FOXR2Q6PJQ5 311 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 NDUFAF2Q8N183 169 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 USP33Q8TEY7 942 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 SKA2Q8WVK7 121 aaPredicted RBP9.78□□□□□ -0.84
CCDC113-201ENST00000219299 CCDC138Q96M89 665 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 CNPY3Q9BT09 278 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 ECT2Q9H8V3 914 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 IRAK4Q9NWZ3 460 aa9.78□□□□□ -0.84
CCDC113-201ENST00000219299 EIF3HO15372 352 aaKnown RBP eCLIP9.77□□□□□ -0.84
CCDC113-201ENST00000219299 RBP3P10745 1247 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 CHRNA3P32297 505 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 KCNJ1P48048 391 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 TRIM60Q495X7 471 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 HP1BP3Q5SSJ5 553 aaPredicted RBP9.77□□□□□ -0.84
CCDC113-201ENST00000219299 FAM228AQ86W67 206 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 GSPT2Q8IYD1 628 aaKnown RBP9.77□□□□□ -0.84
CCDC113-201ENST00000219299 SPATA18Q8TC71 538 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 LRRC15Q8TF66 581 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 PYROXD1Q8WU10 500 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 RNF39Q9H2S5 420 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 BAG5Q9UL15 447 aa9.77□□□□□ -0.84
CCDC113-201ENST00000219299 ARHGAP10A1A4S6 786 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 F8VP50 259 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 FBXO21O94952 628 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 F9P00740 461 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 OR1D2P34982 312 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 RAD23BP54727 409 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 C1QBPQ07021 282 aaKnown RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 USP41Q3LFD5 358 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 FBXO46Q6PJ61 603 aaPredicted RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 SLC30A9Q6PML9 568 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 REXO1L1PQ8IX06 675 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 GFM2Q969S9 779 aaKnown RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 HHIPL1Q96JK4 782 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 TRAIPQ9BWF2 469 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 EMILIN2Q9BXX0 1053 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 SLC28A3Q9HAS3 691 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 ARL5CA6NH57 179 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 PPP1R12AO14974 1030 aaPredicted RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 CLTBP09497 229 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 HSPA1AP0DMV8 641 aaKnown RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 HSPA1BP0DMV9 641 aaKnown RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 YWHAQP27348 245 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 CLCNKBP51801 687 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 KPNA2P52292 529 aaKnown RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 POU5F1BQ06416 359 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 CNGA2Q16280 664 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 CCDC92Q53HC0 331 aaPredicted RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 DENND1BQ6P3S1 775 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 UROC1Q96N76 676 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 CYTH2Q99418 400 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 ULBP1Q9BZM6 244 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 GANQ9H2C0 597 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 ANLNQ9NQW6 1124 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 DPP7Q9UHL4 492 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 KCNN4O15554 427 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 ACSL3O95573 720 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 USP17L7P0C7H9 530 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 SLC11A2P49281 568 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 STX1BP61266 288 aa9.77□□□□□ -0.85
CCDC113-201ENST00000219299 TBX2Q13207 712 aaPredicted RBP9.77□□□□□ -0.85
CCDC113-201ENST00000219299 PPIGQ13427 754 aaKnown RBP eCLIP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms