RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CXCL8P10145 99 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 ESRRAP11474 423 aaPredicted RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 IREB2P48200 963 aaKnown RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 PTPN11Q06124 597 aaPredicted RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 RCN1Q15293 331 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 TSNAXIP1Q2TAA8 658 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 MUM1Q2TAK8 710 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 Q3C1V9 767 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 ATF7IP2Q5U623 682 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 EEF1DP3Q658K8 133 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 DPH6Q7L8W6 267 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 SEPT1Q8WYJ6 367 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 OXNAD1Q96HP4 312 aaPredicted RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 BCO2Q9BYV7 579 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 IQCGQ9H095 443 aaKnown RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 TXNRD2Q9NNW7 524 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 TAS2R1Q9NYW7 299 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 PAPPA2Q9BXP8 1791 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 M0QYV0 167 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 FCHO1O14526 889 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 KRT36O76013 467 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 GJB1P08034 283 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 CCNHP51946 323 aaPredicted RBP17.97■□□□□ 0.47
USB1-201ENST00000219281 LY6KQ17RY6 165 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 ACSBG2Q5FVE4 666 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 TTC39BQ5VTQ0 682 aaPredicted RBP17.97■□□□□ 0.47
USB1-201ENST00000219281 CCDC62Q6P9F0 684 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 TSHZ1Q6ZSZ6 1077 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 SLC26A11Q86WA9 606 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 ERO1BQ86YB8 467 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 UBA3Q8TBC4 463 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 ARMCX1Q9P291 453 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 STOML1Q9UBI4 398 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 OTOFQ9HC10 1997 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 CXorf49A8MYA2 514 aaPredicted RBP17.97■□□□□ 0.47
USB1-201ENST00000219281 CHADO15335 359 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 LINGO3P0C6S8 592 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 ACADSP16219 412 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 YBX3P16989 372 aaKnown RBP eCLIP17.97■□□□□ 0.476e-6■□□□□ 10.9
USB1-201ENST00000219281 PROZP22891 400 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 MXD4Q14582 209 aaPredicted RBP17.97■□□□□ 0.47
USB1-201ENST00000219281 KRT72Q14CN4 511 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 ACAP1Q15027 740 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 C15orf59Q2T9L4 293 aaPredicted RBP17.97■□□□□ 0.47
USB1-201ENST00000219281 CMPK2Q5EBM0 449 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 FAXCQ5TGI0 409 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 WDR78Q5VTH9 848 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 ALYREFQ86V81 257 aaKnown RBP17.97■□□□□ 0.47
USB1-201ENST00000219281 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 MECRQ9BV79 373 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 PTPRHQ9HD43 1115 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 NMRK1Q9NWW6 199 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 TTLL3Q9Y4R7 772 aa17.97■□□□□ 0.47
USB1-201ENST00000219281 INO80B-WBP1J3KQ70 363 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 NVLO15381 856 aaKnown RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 KCNN4O15554 427 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 SPAG6O75602 509 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 ENDOD1O94919 500 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 NFICP08651 508 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 GABRB2P47870 512 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 YWHAZP63104 245 aaKnown RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 CDO1Q16878 200 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 CYP4V2Q6ZWL3 525 aaPredicted RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 C1orf127Q8N9H9 656 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 WDR60Q8WVS4 1066 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 TMEM176AQ96HP8 235 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 ZNF333Q96JL9 665 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 FGD4Q96M96 766 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 NLRP4Q96MN2 994 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 INO80BQ9C086 356 aaPredicted RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 NMUR2Q9GZQ4 415 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 RPF1Q9H9Y2 349 aaKnown RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 USP29Q9HBJ7 922 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 RBPJLQ9UBG7 517 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 CCDC189A1A4V9 331 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 SOCS7O14512 581 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 CXCL11O14625 94 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 C1QAP02745 245 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 GPD1P21695 349 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 VHLP40337 213 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 GPD2P43304 727 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 CPA2P48052 419 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 ZNF143P52747 638 aaPredicted RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 C9orf131Q5VYM1 1079 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 TRNP1Q6NT89 227 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 ANKRD13AQ8IZ07 590 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 RXFP2Q8WXD0 754 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 CDCA5Q96FF9 252 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 HEXIM2Q96MH2 286 aaKnown RBP17.96■□□□□ 0.47
USB1-201ENST00000219281 C2orf40Q9H1Z8 148 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 PNPLA8Q9NP80 782 aa17.96■□□□□ 0.47
USB1-201ENST00000219281 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.96■□□□□ 0.47
USB1-201ENST00000219281 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.96■□□□□ 0.47
USB1-201ENST00000219281 A0A0G2JMZ2 1700 aa17.95■□□□□ 0.46
USB1-201ENST00000219281 DPPA5A6NC42 116 aa17.95■□□□□ 0.46
USB1-201ENST00000219281 SPDYE5A6NIY4 337 aa17.95■□□□□ 0.46
USB1-201ENST00000219281 ACKR2O00590 384 aa17.95■□□□□ 0.46
USB1-201ENST00000219281 GRAP2O75791 330 aa17.95■□□□□ 0.46
USB1-201ENST00000219281 PGK2P07205 417 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms