RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 DTNBP1Q96EV8 351 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 GAD1Q99259 594 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 DPEP3Q9H4B8 488 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 ASNSD1Q9NWL6 643 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 RABL2AQ9UBK7 228 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 GTF2IRD1Q9UHL9 959 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 KIAA1257Q9ULG3 409 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 DERAQ9Y315 318 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 NFS1Q9Y697 457 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 CITO14578 2027 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 KRT7P08729 469 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 ATXN8OSP0DMR3 200 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 CYBAP13498 195 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 CCDC130P13994 396 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 ABL2P42684 1182 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 GPD2P43304 727 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SNX16P57768 344 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 GJA9P57773 515 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 ZNF268Q14587 947 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 KRT71Q3SY84 523 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 KBTBD12Q3ZCT8 623 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SV2CQ496J9 727 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 DUPD1Q68J44 220 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 TXNRD3NBQ6F5E7 133 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 TLDC1Q6P9B6 456 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 XYLT1Q86Y38 959 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 KATNAL2Q8IYT4 538 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 LRRC52Q8N7C0 313 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 CAPNS2Q96L46 248 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 PCYOX1Q9UHG3 505 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SIP14410 1827 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SYNJ2BP-COX16A0A087WUM0 186 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SGK1O00141 431 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ATP2C2O75185 946 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 DNAJC8O75937 253 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 TPPPO94811 219 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 MAN1A1P33908 653 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PNPLA4P41247 253 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 TBX4P57082 545 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ADAM17P78536 824 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 KRT81Q14533 505 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 STILQ15468 1287 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SOWAHAQ2M3V2 549 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PAN2Q504Q3 1202 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CCDC92Q53HC0 331 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 DENND2CQ68D51 928 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ATP11CQ8NB49 1132 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 RXFP2Q8WXD0 754 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 DCLK3Q9C098 648 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 RNF186Q9NXI6 227 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 DDX56Q9NY93 547 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 COX16Q9P0S2 106 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CNTN3Q9P232 1028 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 TIMM13Q9Y5L4 95 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 MEIS3P2A8K0S8 358 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CYB561D2O14569 222 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 GPR182O15218 404 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PRPSAP2O60256 369 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 LMO2P25791 158 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 HOXD10P28358 340 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CD52P31358 61 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 EIF3BP55884 814 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 MAGOHP61326 146 aaKnown RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 QPCTQ16769 361 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 C15orf59Q2T9L4 293 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ZNF618Q5T7W0 954 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 LCLAT1Q6UWP7 414 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SPOCD1Q6ZMY3 1216 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 FAM183BPQ6ZVS7 135 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PRUNE1Q86TP1 453 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ADGRF2Q8IZF7 708 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CCDC197Q8NCU1 140 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CD99L2Q8TCZ2 262 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CHMP6Q96FZ7 201 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 HERPUD2Q9BSE4 406 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 FAM105AQ9NUU6 356 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ANAPC5Q9UJX4 755 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CASTOR2A6NHX0 329 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 MGRN1O60291 552 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 POMCP01189 267 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 THP07101 528 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 GPD1P21695 349 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SDC4P31431 198 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CDH5P33151 784 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PTGIRP43119 386 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PMS2P54278 862 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SOX4Q06945 474 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 UAP1Q16222 522 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 TFDP3Q5H9I0 405 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PMF1Q6P1K2 205 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 RNF180Q86T96 592 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 ARRDC4Q8NCT1 418 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SLC2A14Q8TDB8 520 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CENPTQ96BT3 561 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 TNIP3Q96KP6 325 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms