RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PDCD4Q53EL6 469 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ARMCX4Q5H9R4 360 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 HECTD3Q5T447 861 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RNF43Q68DV7 783 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ATG14Q6ZNE5 492 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CCDC80Q76M96 950 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC44A2Q8IWA5 706 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 RERGLQ9H628 205 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MRPS23Q9Y3D9 190 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 SNX14Q9Y5W7 946 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CYP2E1P05181 493 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ACAT1P24752 427 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 PEX19P40855 299 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MMP14P50281 582 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PWP1Q13610 501 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC2A7Q6PXP3 512 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CHST13Q8NET6 341 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 THUMPD3Q9BV44 507 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 CYLDQ9NQC7 956 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ATAD3AQ9NVI7 634 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CHKBQ9Y259 395 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MYO5BQ9ULV0 1848 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NKRFO15226 690 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-201ENST00000172853 PLEKHA8P1O95397 391 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 GLP2RO95838 553 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PDGFRBP09619 1106 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RFC5P40937 340 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC7A2P52569 658 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ZSCAN26Q16670 478 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SETMARQ53H47 684 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 SARM1Q6SZW1 724 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ECSITQ9BQ95 431 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 FAM213AQ9BRX8 229 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 KLHL4Q9C0H6 718 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 POLR3FQ9H1D9 316 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 XPNPEP3Q9NQH7 507 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 AK5Q9Y6K8 562 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 VIRMAQ69YN4 1812 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 MROH7-TTC4A0A0A0MT08 1334 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PDS5AQ29RF7 1337 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 MYPNQ86TC9 1320 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RTCAO00442 366 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 PRPF3O43395 683 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 A1BGP04217 495 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CSH1P0DML2 217 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CSH2P0DML3 217 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NTSP30990 170 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CLK1P49759 484 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 RIDAP52758 137 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 CACNB3P54284 484 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ARF3P61204 181 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ARF1P84077 181 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 RGS1Q08116 209 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PCSK7Q16549 785 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TMEM270Q6UE05 265 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SEPT1Q8WYJ6 367 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 WWP1Q9H0M0 922 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ADARB2Q9NS39 739 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 MOCS1Q9NZB8 636 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 CHORDC1Q9UHD1 332 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 STARD13Q9Y3M8 1113 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 HBS1LQ9Y450 684 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 FGD6Q6ZV73 1430 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TRIM64CA6NLI5 447 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PQBP1O60828 265 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 RUNX2Q13950 521 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 KBTBD12Q3ZCT8 623 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TSHZ3Q63HK5 1081 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SYCE2Q6PIF2 218 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 RGS9BPQ6ZS82 235 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 USP33Q8TEY7 942 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PIGKQ92643 395 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 THRSPQ92748 146 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 UBE2E3Q969T4 207 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PRDM16Q9HAZ2 1276 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NENFQ9UMX5 172 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 LRRC9Q6ZRR7 1453 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 ABCC4O15439 1325 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 PGRMC1O00264 195 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 IL1AP01583 271 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 OAS2P29728 719 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 CPA6Q8N4T0 437 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC16A10Q8TF71 515 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TMEM159Q96B96 161 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TMEM60Q9H2L4 133 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 MRPL17Q9NRX2 175 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-201ENST00000172853 SLC9A2Q9UBY0 812 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 SRP68Q9UHB9 627 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 RABGEF1Q9UJ41 708 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 KIAA1257Q9ULG3 409 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 WASF3Q9UPY6 502 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 HYKKA2RU49 373 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 NOL4O94818 638 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 APODP05090 189 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 BEND6Q5SZJ8 279 aaPredicted RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 ZNF697Q5TEC3 545 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TYW3Q6IPR3 259 aaKnown RBP3.55□□□□□ -1.84
NEB-201ENST00000172853 C16orf59Q7L2K0 433 aa3.55□□□□□ -1.84
NEB-201ENST00000172853 TLK2Q86UE8 772 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms