RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SYN3O14994 580 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ALDH2P05091 517 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PTGIRP43119 386 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 LMAN1P49257 510 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SLC11A1P49279 550 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HDAC4P56524 1084 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 IKBKEQ14164 716 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 KAZNQ674X7 775 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 JAMLQ86YT9 394 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CMASQ8NFW8 434 aaPredicted RBP20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SEC14L1Q92503 715 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM149B1Q96BN6 582 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM204AQ9H8W3 233 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CD48P09326 243 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM153BP0C7A2 387 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 KDELR1P24390 212 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ITGB8P26012 769 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 KCNJ1P48048 391 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM153CQ494X1 144 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 IFT81Q8WYA0 676 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CENPIQ92674 756 aaPredicted RBP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DDX23Q9BUQ8 820 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 GPR62Q9BZJ7 368 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM153AQ9UHL3 310 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 MYO16Q9Y6X6 1858 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PRPSAP2O60256 369 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 UPP2O95045 317 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PBX3P40426 434 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 MATKP42679 507 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 YWHAZP63104 245 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 VARS2Q5ST30 1063 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CCDC105Q8IYK2 499 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 LRRC43Q8N309 656 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HSPH1Q92598 858 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ULBP1Q9BZM6 244 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DCLK3Q9C098 648 aa20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DMAP1Q9NPF5 467 aaPredicted RBP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 UTP11Q9Y3A2 253 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TJP3O95049 919 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 OR4Q2P0C623 313 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DESP17661 470 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TAZQ16635 292 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM171A1Q5VUB5 890 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TMEM173Q86WV6 379 aaPredicted RBP20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DDX42Q86XP3 938 aaKnown RBP eCLIP20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DEFB106AQ8N104 65 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CNGB3Q9NQW8 809 aa20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.56■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM187AA6NFU0 413 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NT5C1B-RDH14C9J2C7 533 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FBXO21O94952 628 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 GALTP07902 379 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 RFC2P35250 354 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DAOAP59103 153 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NNTQ13423 1086 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SNX1Q13596 522 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SCYL2Q6P3W7 929 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 RUNDC3BQ96NL0 473 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FAM118BQ9BPY3 351 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ERP44Q9BS26 406 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 COLEC11Q9BWP8 271 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 RAB17Q9H0T7 212 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DAB1O75553 588 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ECHS1P30084 290 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CUL1Q13616 776 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 C4orf50Q6ZRC1 276 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HFE2Q6ZVN8 426 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CEP57Q86XR8 500 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 KCTD6Q8NC69 237 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SLCO2A1Q92959 643 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 B3GALT6Q96L58 329 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TMEM175Q9BSA9 504 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ZCWPW1Q9H0M4 648 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 HOMER3Q9NSC5 361 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CALCOCO1Q9P1Z2 691 aa20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SF3B1O75533 1304 aaKnown RBP eCLIP20.55■□□□□ 0.88
TNFRSF1A-201ENST00000162749 YJEFN3A6XGL0 299 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 E7ENQ6 273 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DAPK3O43293 454 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ENDOD1O94919 500 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 USP17L7P0C7H9 530 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 ATXN1P54253 815 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 CCNG2Q16589 344 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SLC39A12Q504Y0 691 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DCAF6Q58WW2 860 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 FUT10Q6P4F1 479 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SPATA2LQ8IUW3 424 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NT5C3BQ969T7 300 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TBCBQ99426 244 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 SH3GL2Q99962 352 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 NCAPGQ9BPX3 1015 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 POPDC2Q9HBU9 364 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PNPLA8Q9NP80 782 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 EFR3BQ9Y2G0 817 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 PTPRSQ13332 1948 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TRIM43BA6NCK2 446 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 DGKIO75912 1065 aa20.54■□□□□ 0.88
TNFRSF1A-201ENST00000162749 TIMP1P01033 207 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms