RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 POU6F1Q14863 301 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 CCDC60Q8IWA6 550 aaPredicted RBP19.47■□□□□ 0.71
MBD3-201ENST00000156825 RIBC1Q8N443 379 aaPredicted RBP19.47■□□□□ 0.71
MBD3-201ENST00000156825 ACTRT1Q8TDG2 376 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 GTPBP10A4D1E9 387 aaKnown RBP19.47■□□□□ 0.71
MBD3-201ENST00000156825 SOAT1P35610 550 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 LAMB3Q13751 1172 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 STRA8Q7Z7C7 330 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 EXD1Q8NHP7 514 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 PPCSQ9HAB8 311 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 DDHD2O94830 711 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 F9P00740 461 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 TGFB3P10600 412 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 PTAR1Q7Z6K3 402 aaPredicted RBP19.47■□□□□ 0.71
MBD3-201ENST00000156825 ERLEC1Q96DZ1 483 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 C17orf80Q9BSJ5 609 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 ZNF518BQ9C0D4 1074 aa19.47■□□□□ 0.71
MBD3-201ENST00000156825 FAM32AQ9Y421 112 aaKnown RBP19.47■□□□□ 0.71
MBD3-201ENST00000156825 COL5A2P05997 1499 aaPredicted RBP19.47■□□□□ 0.71
MBD3-201ENST00000156825 BST2Q10589 180 aaKnown RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 KCNMA1Q12791 1236 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 OVOS1Q6IE37 1185 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 CES3Q6UWW8 571 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 ARHGAP18Q8N392 663 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 CIPCQ9C0C6 399 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 C2orf81A6NN90 581 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 CLASP2O75122 1294 aaKnown RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 TMC7Q7Z402 723 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 TRIM45Q9H8W5 580 aaPredicted RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 HAO1Q9UJM8 370 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 A0A0U1RQJ8 604 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 POLD3Q15054 466 aaPredicted RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 MTFR1Q15390 333 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 MRNIPQ6NTE8 343 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 TLK2Q86UE8 772 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 COLGALT1Q8NBJ5 622 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 ENTPD7Q9NQZ7 604 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 BARX2Q9UMQ3 279 aaPredicted RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 ITSN1Q15811 1721 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 PBLDP30039 288 aaPredicted RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 KCNK10P57789 538 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 MED21Q13503 144 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 GALNTL6Q49A17 601 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 WDR93Q6P2C0 686 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 ILKAPQ9H0C8 392 aaPredicted RBP19.46■□□□□ 0.71
MBD3-201ENST00000156825 TRPM5Q9NZQ8 1165 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 HES2Q9Y543 173 aa19.46■□□□□ 0.71
MBD3-201ENST00000156825 TRIM16O95361 564 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 TFE3P19532 575 aaPredicted RBP19.45■□□□□ 0.7
MBD3-201ENST00000156825 AMPD1P23109 780 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 SLC12A3P55017 1021 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 OXCT1P55809 520 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 VGLL4Q14135 290 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 MOB2Q70IA6 237 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 SLC2A14Q8TDB8 520 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 NSL1Q96IY1 281 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 O00370 1275 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 MFSD7Q6UXD7 560 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 ZNF513Q8N8E2 541 aaPredicted RBP19.45■□□□□ 0.7
MBD3-201ENST00000156825 MYCBPAPQ8TBZ2 947 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 FAM84AQ96KN4 292 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 PTPRHQ9HD43 1115 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 RBM22Q9NW64 420 aaKnown RBP eCLIP19.45■□□□□ 0.71e-7■■■■■ 30.3
MBD3-201ENST00000156825 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 PRAMEF19Q5SWL8 479 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 ANKS3Q6ZW76 656 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 FAM162AQ96A26 154 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 PTPRAP18433 802 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 NLRP9Q7RTR0 991 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 PCSK9Q8NBP7 692 aaKnown RBP19.45■□□□□ 0.7
MBD3-201ENST00000156825 FAM163AQ96GL9 167 aaPredicted RBP19.45■□□□□ 0.7
MBD3-201ENST00000156825 RNF112Q9ULX5 631 aa19.45■□□□□ 0.7
MBD3-201ENST00000156825 H3BQF6 201 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 SCAMP3O14828 347 aaKnown RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 PRLRP16471 622 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 RPL10AP62906 217 aaKnown RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 AADACL2Q6P093 401 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 TLR10Q9BXR5 811 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 PPP3CAQ08209 521 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 CSHL1Q14406 222 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 CAPRIN2Q6IMN6 1127 aaKnown RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 ANKZF1Q9H8Y5 726 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 LRRC40Q9H9A6 602 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 GOLGA8TH3BQL2 631 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 ALDH2P05091 517 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 URODP06132 367 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 LHX1P48742 406 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 PWP1Q13610 501 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 CCNG2Q16589 344 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 GJC2Q5T442 439 aaPredicted RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 GRAMD4Q6IC98 578 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 C4orf22Q6V702 233 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 SLC44A2Q8IWA5 706 aaPredicted RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 OR9Q1Q8NGQ5 310 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 THUMPD3Q9BV44 507 aaKnown RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 CYP3A43Q9HB55 503 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 AAR2Q9Y312 384 aaKnown RBP19.44■□□□□ 0.7
MBD3-201ENST00000156825 SOAT2O75908 522 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 ARL4DP49703 201 aa19.44■□□□□ 0.7
MBD3-201ENST00000156825 ARHGAP15Q53QZ3 475 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms