RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 DPYSL2Q16555 572 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 CDO1Q16878 200 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 TUBB8Q3ZCM7 444 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RAB41Q5JT25 222 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 FAM171BQ6P995 826 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 BNIPLQ7Z465 357 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RTN4RL1Q86UN2 441 aaPredicted RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 FAM35AQ86V20 835 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 SLC2A13Q96QE2 648 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RTP3Q9BQQ7 232 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 PAAF1Q9BRP4 392 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 SNRNP25Q9BV90 132 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 CALN1Q9BXU9 219 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 MAK16Q9BXY0 300 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 ADAM7Q9H2U9 754 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 LRRC4Q9HBW1 653 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 PCDH18Q9HCL0 1135 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 PRDM10Q9NQV6 1147 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 MYBPHLA2RUH7 354 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 CLDN5O00501 218 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 RIPK2O43353 540 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 BEST1O76090 585 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 B3GAT3O94766 335 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 POMCP01189 267 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 TYMPP19971 482 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 TGM2P21980 687 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 YWHAZP63104 245 aaKnown RBP14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 DMTNQ08495 405 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 ADIGQ0VDE8 80 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 KRT81Q14533 505 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 NOMO1Q15155 1222 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 SLC25A52Q3SY17 297 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 ERMARDQ5T6L9 678 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 SLC9A4Q6AI14 798 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 METTL23Q86XA0 190 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 ZCCHC9Q8N567 271 aaKnown RBP14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 RNF169Q8NCN4 708 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 OR2W6PQ8NHA6 318 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 PCED1BQ96HM7 432 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 SUSD3Q96L08 255 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 MED10Q9BTT4 135 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 FTHL17Q9BXU8 183 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 PRDM16Q9HAZ2 1276 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 CSNK1G1Q9HCP0 422 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 KRT82Q9NSB4 513 aa14.94□□□□□ -0.02
RTFDC1-201ENST00000023939 FRMPD3Q5JV73 1810 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 SHOX2O60902 331 aaPredicted RBP14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 NOS2P35228 1153 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 CHKAP35790 457 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 CDK7P50613 346 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 DYNLT1P63172 113 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 DSC1Q08554 894 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 SLC29A2Q14542 456 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 MORF4L2Q15014 288 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 CCDC142Q17RM4 750 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 P3H1Q32P28 736 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 SCYL2Q6P3W7 929 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 GLB1LQ6UWU2 654 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 KDM7AQ6ZMT4 941 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 GLIS1Q8NBF1 620 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 RSPH1Q8WYR4 309 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 HAUS1Q96CS2 278 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 SMOQ99835 787 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 TMEM121Q9BTD3 319 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 PHACTR1Q9C0D0 580 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 CNGB3Q9NQW8 809 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 TPX2Q9ULW0 747 aaKnown RBP14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 SHOC2Q9UQ13 582 aa14.93□□□□□ -0.02
RTFDC1-201ENST00000023939 TMEM189-UBE2V1I3L0A0 370 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SGK1O00141 431 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SMAPO00193 183 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 MCF2LO15068 1137 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 AP1G2O75843 785 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PECAM1P16284 738 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 TFE3P19532 575 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 STIP1P31948 543 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 VPS41P49754 854 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 EIF3EP60228 445 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 IFFO1Q0D2I5 559 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 ANKRD20A8PQ5CZ79 823 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 INTS6LQ5JSJ4 861 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PCGF5Q86SE9 256 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 DEFB106AQ8N104 65 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SIX6OS1Q8N1H7 587 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SCML4Q8N228 414 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PQLC3Q8N755 202 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PLD5Q8N7P1 536 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 ZMIZ2Q8NF64 920 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 LINC01599Q8WXQ3 324 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 PGM2Q96G03 612 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 SMARCD1Q96GM5 515 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 NPY6RQ99463 290 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 ADAM33Q9BZ11 813 aa14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 ROPN1BQ9BZX4 212 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.92□□□□□ -0.02
RTFDC1-201ENST00000023939 CDC42EP4Q9H3Q1 356 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms