RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Myh4Q5SX39 1939 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Lrrc73B2RWC4 316 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Mup5P11591 180 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Rgs9bpQ148R9 237 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ccndbp1Q3TVC7 356 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Otud5Q3U2S4 566 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Nrde2Q80XC6 1172 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Taf5Q8C092 801 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 RybpQ8CCI5 228 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Spag16Q8K450 639 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Utp6Q8VCY6 597 aaKnown RBP9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Q9D2Q3 444 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Fam162aQ9D6U8 155 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Sv2aQ9JIS5 742 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Chek2Q9Z265 546 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Vwa5b1A9Z1V5 1215 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 AurkcO88445 282 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Itm2bO89051 266 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 WhammQ571B6 793 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Plk4Q64702 925 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Sarm1Q6PDS3 724 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 E2f7Q6S7F2 904 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Mical2Q8BML1 960 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Anapc2Q8BZQ7 837 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gtse1Q8R080 741 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Def8Q99J78 448 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 TrabdQ99JY4 376 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Ndufs6P52503 116 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Pkn1P70268 946 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Afap1l1Q8BZI0 768 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 ScgnQ91WD9 276 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Pcdha11Q91Y19 950 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 4930550L24RikQ99PA7 320 aa9.53□□□□□ -0.88
Scn8a-213ENSMUST00000201549 AdssP46664 456 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Mmp20P57748 482 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Kcna2P63141 499 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Cnot7Q60809 285 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Kpna1Q60960 538 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Tmcc1Q69ZZ6 649 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Olfr293Q7TS10 336 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Pcmtd2Q8BHD8 359 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Hars2Q99KK9 505 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Lrrc57Q9D1G5 239 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Gm5114W4VSN8 858 aa9.52□□□□□ -0.88
Scn8a-213ENSMUST00000201549 Zfp626A0A0U1RQ84 676 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Vmn2r121A2BE32 847 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Akap1O08715 857 aaKnown RBP9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Uchl4P58321 233 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tubgcp3P58854 905 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 4933427I04RikQ3V053 235 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Raver2Q7TPD6 673 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 CherpQ8CGZ0 936 aaKnown RBP9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ttc23Q8CHY7 488 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trpv2Q9WTR1 756 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Scgb2b12S4R2L0 112 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Atp8b4A2ANX3 1194 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 GclcP97494 637 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Sox10Q04888 466 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Kcnj11Q61743 390 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Klhdc10Q6PAR0 439 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr670Q7TRP3 312 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Elmo2Q8BHL5 732 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Phka2Q8BWJ3 1235 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Bbs2Q9CWF6 721 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 PudpQ9D5U5 234 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Slit2Q9R1B9 1521 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fam81bA0A140LI28 432 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pole2O54956 527 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Atp9aO70228 1047 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Csnk2bP67871 215 aaKnown RBP9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Teddm2Q208S0 260 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Aldh16a1Q571I9 802 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Znf451Q8C0P7 1056 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Klhl2Q8JZP3 593 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Dcaf6Q9DC22 876 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 C1qtnf1Q9QXP7 281 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pex5O09012 639 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 FkbplO35450 347 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Bmpr2O35607 1038 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 WapP01173 134 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Slc2a4P14142 509 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 SnrpfP62307 86 aaKnown RBP9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Yy1Q00899 414 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Garnl3Q3V0G7 1038 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mks1Q5SW45 561 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Grid1Q61627 1009 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Phc1Q64028 1012 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfml3Q8BK62 406 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Wdr35Q8BND3 1181 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pde10aQ8CA95 790 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gpc3Q8CFZ4 579 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mrpl47Q8K2Y7 252 aa9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ddx28Q9CWT6 540 aaKnown RBP9.52□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rhox3fA2ANE1 215 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gbp11A9YVJ5 442 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pde8aO88502 823 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Akap10O88845 662 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rnf113a2Q14B01 337 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Bpifb5Q3UQ05 490 aa9.51□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lcp1Q61233 627 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms