RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 1810065E05RikQ5NC41 235 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Clec4a4Q5YIR8 236 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 GpamQ61586 827 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Itih1Q61702 907 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slc17a6Q8BLE7 582 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Acad10Q8K370 1069 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tesk2Q8VCT9 570 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Dapk2Q8VDF3 370 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Itsn1Q9Z0R4 1714 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Grin3aA2AIR5 1135 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Lrrc38A2VDH3 298 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Krt83E9Q1Y9 479 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Sult3a1O35403 293 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pde9aO70628 534 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Hk1P17710 974 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Lypla1P97823 230 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Zfp956Q3UZY6 572 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Olfr813Q7TRH5 310 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pak4Q8BTW9 593 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Trim14Q8BVW3 440 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Strip1Q8C079 837 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Sulf1Q8K007 870 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Alg9Q8VDI9 611 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rin1Q921Q7 763 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Pds5aQ6A026 1332 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slit3Q9WVB4 1523 aa12.76□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Timm44O35857 452 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rps6P62754 249 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 PtprvP70289 1705 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gpr156Q6PCP7 798 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 DstykQ6XUX1 927 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 DcstampQ7TNJ0 470 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Q8BGN9 141 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Smtnl2Q8CI12 456 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ces4aQ8R0W5 563 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Vmn1r64Q8R2B8 320 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tcaf2Q921K8 919 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 NonoQ99K48 473 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slc24a3Q99PD7 645 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Mmp19Q9JHI0 527 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ebf1Q07802 591 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tfdp1Q08639 410 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tmem26Q3UP23 366 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ptger2Q62053 362 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 SnrpaQ62189 287 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rbl2Q64700 1135 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Nrbf2Q8VCQ3 287 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gpc1Q9QZF2 557 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 AfdnQ9QZQ1 1820 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Iqca1lA6H690 825 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Zw10O54692 779 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Eif3eP60229 445 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Frg1P97376 258 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Fam117bQ3U3E2 584 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Qrich1Q3UA37 777 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Fam91a1Q3UVG3 837 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Syce1lQ5D525 247 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 RetsatQ64FW2 609 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Sh3tc2Q80VA5 1289 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Zfp454Q80Y34 536 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Klhl42Q8BFQ9 493 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Phf20Q8BLG0 1010 aaKnown RBP12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Bhlhe22Q8C6A8 355 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Atxn7Q8R4I1 867 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 4921530L21RikQ9CQ47 274 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 PompQ9CQT5 141 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Med10Q9CXU0 135 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 1700018B08RikQ9DA83 213 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 MycsQ9Z304 431 aa12.75□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 MtrA6H5Y3 1253 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Tex28B1AYN9 409 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Shoc2O88520 582 aaKnown RBP12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ppp3ccP48455 513 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gm13103Q4VAD2 491 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Nsun6Q7TS68 476 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Slc12a8Q8VI23 705 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Cd2bp2Q9CWK3 342 aaKnown RBP12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Mrpl2Q9D773 306 aaKnown RBP12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Dctn3Q9Z0Y1 186 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ecm29Q6PDI5 1840 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Adgra3Q7TT36 1310 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Esp31A8R0W3 114 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Gm5689F6Y2A6 97 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Aoc3O70423 765 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Jak1P52332 1153 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Arpc4P59999 168 aaKnown RBP12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Serpina1cQ00896 412 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 InscQ3HNM7 579 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ccser2Q3UHI0 833 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rpl10Q6ZWV3 214 aaKnown RBP12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Znf423Q80TS5 1292 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 TxlngQ8BHN1 524 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Ccdc17Q8CE13 565 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Dtwd1Q9D8U7 304 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Paqr5Q9DCU0 330 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Eya4Q9Z191 616 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Fam205aA2APU8 1308 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Kcnj6P48542 425 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Fam92bQ3V2J0 292 aa12.74□□□□□ -0.37
Pcdh1-202ENSMUST00000159405 Rab26Q504M8 260 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms