RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Gm42641I6L9G2 585 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Gm3383J3QQ59 259 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Usp35M0QWN7 1009 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Casq2O09161 415 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Nek2O35942 443 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 P01644 108 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 P01645 108 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 P01646 108 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 P01647 108 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 P01652 108 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Slc10a3P21129 473 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Vav1P27870 845 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Rpl22P67984 128 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Npas2P97460 816 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 EnahQ03173 802 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Cd163Q2VLH6 1121 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Mylk3Q3UIZ8 795 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Pld5Q3UNN8 536 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Rbm20Q3UQS8 1199 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Itga1Q3V3R4 1179 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Ifnl2Q4VK74 193 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Klra4Q60651 263 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Tas2r125Q7M710 311 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Stk40Q7TNL3 435 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Gabbr2Q80T41 940 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Wnk4Q80UE6 1222 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 AtripQ8BMG1 785 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Neto2Q8BNJ6 525 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Rccd1Q8BTU7 377 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Gpr20Q8BYC4 358 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Sh3rf3Q8C120 878 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Usp27Q8CEG8 438 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Lonp1Q8CGK3 949 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Tbc1d19Q8VDV7 526 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 AclyQ91V92 1091 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Pth2rQ91V95 546 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 PlvapQ91VC4 438 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Spns2Q91VM4 549 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Slc13a3Q91Y63 600 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Afg3l1Q920A7 789 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Clstn3Q99JH7 956 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Decr1Q9CQ62 335 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Psma8Q9CWH6 250 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Pramef12Q9D2F1 463 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Hsf2bpQ9D4G2 338 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Ascc1Q9D8Z1 356 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Iqcf1Q9D9K8 182 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Scyl1Q9EQC5 806 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 PrccQ9EQC8 491 aaKnown RBP11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Cpxm1Q9Z100 722 aa11.77□□□□□ -0.52
Vamp1-202ENSMUST00000063588 Nlrc5C3VPR6 1915 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Kif26aQ52KG5 1881 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Gm13276A0A087WR18 182 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Siah3B2RWG3 268 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 9330159F19RikD3Z623 648 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Ccdc24E9PUW8 296 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Gm10722F6VLK5 217 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 XntrpcF8VQM8 1264 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 E030030I06RikJ3QML9 246 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Pim1P06803 397 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 CcnoP0C242 352 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Ces1cP23953 554 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Gdf6P43028 454 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Anxa5P48036 319 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Kcnn2P58390 839 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 YwhazP63101 245 aaKnown RBP11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Adamts1P97857 968 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Rplp2P99027 115 aaKnown RBP11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Smpd1Q04519 627 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 4930502E18RikQ14BQ3 236 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Slc38a5Q3U1J0 479 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Rrp36Q3UFY0 244 aaKnown RBP11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Nt5dc3Q3UHB1 546 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Psg28Q4KL66 472 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Pla2g4dQ50L43 825 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Taok1Q5F2E8 1001 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 RbfaQ6P3B9 350 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Vmn2r26Q6TAC4 855 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Tas2r102Q7M717 329 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Cyth4Q80YW0 393 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Rnf187Q8BFX1 236 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Tmem220Q8BP07 167 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Nipal4Q8BZF2 406 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Lrrc4cQ8C031 640 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Tmem120aQ8C1E7 343 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Wdr27Q8C5V5 780 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Rassf9Q8K342 435 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 MgarpQ8VI64 283 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Lims2Q91XD2 341 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Msantd4Q91YU3 345 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Fuca1Q99LJ1 452 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Lpin3Q99PI4 848 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Dcp2Q9CYC6 422 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Cep83Q9D5R3 692 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Spata9Q9D9R3 252 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Abcg8Q9DBM0 673 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Mgea5Q9EQQ9 916 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Vwa7Q9JHA8 891 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Pcsk1nQ9QXV0 258 aa11.77□□□□□ -0.53
Vamp1-202ENSMUST00000063588 Phf2Q9WTU0 1096 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms