RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mtnd3P03899 115 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fgd2Q8BY35 655 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Q8C1R3 189 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tldc1Q8K0P3 455 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fam20bQ8VCS3 409 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cyp2c70Q91W64 489 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Sgf29Q9DA08 293 aaKnown RBP12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Alkbh1P0CB42 389 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Prox1P48437 737 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Efr3aQ8BG67 819 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Lrrc4bP0C192 709 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cd40lgP27548 260 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 CartptP56388 129 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Irx2P81066 474 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Plekha7Q3UIL6 1118 aaKnown RBP12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr293Q7TS10 336 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Znf451Q8C0P7 1056 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Uba3Q8C878 462 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Alx1Q8C8B0 326 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Akr1c21Q91WR5 323 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Syt12Q920N7 421 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ninj2Q9JL89 143 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Flt4P35917 1363 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tcf12Q61286 706 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Lpin2Q99PI5 893 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Sfmbt1Q9JMD1 863 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 A430078G23RikE9Q7Y4 484 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gm10436L7N1Y3 520 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ccnd2P30280 289 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 CcnjlQ5SRT8 387 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Q8CIL4 281 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Dyrk1bQ9Z188 629 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 GemP55041 295 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Scrn3Q3TMH2 418 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fam83fQ3UKU4 495 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Lrrc47Q505F5 581 aaKnown RBP12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Iqcf4Q6P8Y2 204 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mis18bp1Q80WQ8 998 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ift46Q9DB07 301 aa12.3□□□□□ -0.44
Trim56-201ENSMUST00000054384 Atp8b4A2ANX3 1194 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Vps26aP40336 327 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Znf280cQ6P3Y5 742 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 GskipQ8BGR8 139 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rps6kl1Q8R2S1 544 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Chaf1bQ9D0N7 572 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 MceeQ9D1I5 178 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Myh8P13542 1937 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Oog1E9Q5G7 496 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cdk4P30285 303 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ifnar1P33896 590 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fgfr4Q03142 799 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ceacam5Q3UKK2 947 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zfp90Q61967 636 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cdc73Q8JZM7 531 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tcp10cE9Q046 482 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Nr0b1Q61066 472 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Dpf2Q61103 391 aaKnown RBP12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Npdc1Q64322 332 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Olfr297Q7TS07 310 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 BspryQ80YW5 473 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pdzph1Q8BGR1 1238 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Nemp2Q8CB65 421 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Taf6lQ8R2K4 616 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Pcdhga10Q91XY9 930 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mettl13Q91YR5 698 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Mrpl28Q9D1B9 257 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ankef1Q9D2J7 775 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Kiaa0556Q8C753 1610 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zfy1P10925 782 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Calb2Q08331 271 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 DstykQ6XUX1 927 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Hus1Q8BQY8 280 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Exd2Q8VEG4 650 aaKnown RBP12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rwdd4Q9CPR1 188 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Gcnt4E9Q649 455 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Abi2P62484 446 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fam198aQ3UY90 562 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tcf4Q60722 670 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Maml1Q6T264 1020 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Zfyve28Q6ZPK7 905 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Khdrbs3Q9R226 346 aaKnown RBP12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Casz1Q9CWL2 1761 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Adgrb3Q80ZF8 1522 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Ttc23lA6H6E9 458 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cyp2c68K7N6C2 491 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Il1aP01582 270 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cyp3a11Q64459 504 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Fam102bQ8BQS4 339 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 GaleQ8R059 347 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Nmd3Q99L48 503 aaKnown RBP12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Uchl3Q9JKB1 230 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Myh4Q5SX39 1939 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rbp1Q00915 135 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Togaram2Q3TYG6 1002 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Tmem260Q8BMD6 703 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Reep2Q8VCD6 254 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Bloc1s6Q9R0C0 172 aa12.29□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cyp2c69E9PXC3 491 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Cyp2c40P56657 491 aa12.28□□□□□ -0.44
Trim56-201ENSMUST00000054384 Rexo4Q6PAQ4 432 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms