RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Kat14Q8CID0 779 aa15.57■□□□□ 0.08
Nup54-201ENSMUST00000038514 C8aQ8K182 587 aa15.57■□□□□ 0.08
Nup54-201ENSMUST00000038514 Rnf112Q96DY5 654 aa15.57■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ubxn11Q9D572 484 aa15.57■□□□□ 0.08
Nup54-201ENSMUST00000038514 Scyl1Q9EQC5 806 aaKnown RBP15.57■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tmem59Q9QY73 323 aa15.57■□□□□ 0.08
Nup54-201ENSMUST00000038514 SpibO35906 267 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Usp10P52479 792 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 SnnP61807 88 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 S100a5P63084 93 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Fam91a1Q3UVG3 837 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 CttnQ60598 546 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Itih3Q61704 889 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 PrkciQ62074 595 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Atg9bQ6EBV9 922 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 ItpkcQ7TS72 678 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 CyldQ80TQ2 952 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Znf598Q80YR4 908 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Enpp4Q8BTJ4 456 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Atg16l1Q8C0J2 607 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Hdac7Q8C2B3 938 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Acvr1cQ8K348 493 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tas1r2Q925I4 843 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Grk2Q99MK8 689 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 AenQ9CZI9 336 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Q9D1Z2 194 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Chst7Q9EP78 484 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cyp2a22B2RXZ2 492 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Apol11aE9PZG0 334 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gm379J3QQ19 296 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 GclmO09172 274 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ptpn11P35235 597 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 CiitaP79621 1155 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Utp14bQ6EJB6 756 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ubxn7Q6P5G6 467 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Scaf4Q6PFF0 1209 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gigyf2Q6Y7W8 1291 aaKnown RBP15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Fam102aQ78T81 392 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 PolnQ7TQ07 864 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Neto2Q8BNJ6 525 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tgif2lx2Q8K5B9 231 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Il36gQ8R460 164 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ugp2Q91ZJ5 508 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tssk3Q9D2E1 268 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ccdc103Q9D9P2 237 aa15.56■□□□□ 0.08
Nup54-201ENSMUST00000038514 PhipQ8VDD9 1821 aaKnown RBP15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tnk2O54967 1055 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 IapP03975 557 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mov10P23249 1004 aaKnown RBP15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ndufs6P52503 116 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Pld5Q3UNN8 536 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cfhr2Q4LDF6 332 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 PapolaQ61183 739 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Q810S2 196 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 CntrobQ8CB62 887 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mamdc2Q8CG85 686 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Arhgap29Q8CGF1 1266 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Txndc12Q9CQU0 170 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 TtpalQ9D3D0 343 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Fam90a1bQ9D4F3 419 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Hsd17b14E9Q3D4 273 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Slc10a3P21129 473 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 RenbpP82343 430 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tfdp1Q08639 410 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Arid5aQ3U108 590 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mapk4Q6P5G0 583 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ip6k2Q80V72 448 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ppp1r12bQ8BG95 976 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Phactr3Q8BYK5 558 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Nudcd3Q8R1N4 363 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Xpo5Q924C1 1204 aaKnown RBP15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Actr3Q99JY9 418 aaKnown RBP15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Bco2Q99NF1 532 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Trem2Q99NH8 227 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Psmd8Q9CX56 353 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tspan17Q9D7W4 270 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Ccr10Q9JL21 362 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Piwil1Q9JMB7 862 aa15.55■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cdr2lA2A6T1 465 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Cyp2t4E9PWV0 503 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Lta4hP24527 611 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tfap2aP34056 437 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Irf3P70671 419 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Gm3414Q3TNU4 584 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mrgprx2Q3UG50 352 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Fam214aQ69ZK7 1075 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Got1l1Q7TSV6 404 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tmem74Q8BQU7 305 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Bmt2Q8BXK4 403 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Kctd15Q8K0E1 283 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Mtss1Q8R1S4 759 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Myoz3Q8R4E4 245 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Olfr395Q8VGR3 312 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Rec114Q9CWH4 259 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Bbs5Q9CZQ9 341 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 PolhQ9JJN0 694 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 ClcnkbQ9WUB6 687 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Zbtb11G5E8B9 1050 aaKnown RBP15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Tnfrsf11bO08712 401 aa15.54■□□□□ 0.08
Nup54-201ENSMUST00000038514 Hoxb8P09632 243 aa15.54■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms