RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	MTC5	Q03897	1148 aa		5.05	□□□□□ -1.6
SGN1	YIR001C	RRT14	P40470	206 aa		5.04	□□□□□ -1.6
SGN1	YIR001C	UTP22	P53254	1237 aa	Predicted RBP	5.04	□□□□□ -1.6
SGN1	YIR001C	ADE16	P54113	591 aa	Known RBP	5.04	□□□□□ -1.6
SGN1	YIR001C	YLR419W	Q06698	1435 aa	Known RBP	5.04	□□□□□ -1.6
SGN1	YIR001C	RAD4	P14736	754 aa		5.03	□□□□□ -1.6
SGN1	YIR001C	TOS1	P38288	455 aa		5.03	□□□□□ -1.6
SGN1	YIR001C	YER156C	P40093	338 aa	Known RBP	5.03	□□□□□ -1.6
SGN1	YIR001C	RRN7	P40992	514 aa		5.03	□□□□□ -1.6
SGN1	YIR001C	SQS1	P53866	767 aa	Known RBP	5.03	□□□□□ -1.6
SGN1	YIR001C	RPO41	P13433	1351 aa	Known RBP	5.03	□□□□□ -1.6
SGN1	YIR001C	SSA4	P22202	642 aa	Known RBP	5.02	□□□□□ -1.61
SGN1	YIR001C	GRX1	P25373	110 aa	Known RBP	5.02	□□□□□ -1.61
SGN1	YIR001C	YKL222C	P35995	705 aa		5.02	□□□□□ -1.61
SGN1	YIR001C	FAS2	P19097	1887 aa	Known RBP	5.02	□□□□□ -1.61
SGN1	YIR001C	PDI1	P17967	522 aa	Known RBP	5.01	□□□□□ -1.61
SGN1	YIR001C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
SGN1	YIR001C	CWH41	P53008	833 aa		5.01	□□□□□ -1.61
SGN1	YIR001C	ERF2	Q06551	359 aa		5.01	□□□□□ -1.61
SGN1	YIR001C	MMP1	Q12372	583 aa		5.01	□□□□□ -1.61
SGN1	YIR001C	SIR4	P11978	1358 aa		5.01	□□□□□ -1.61
SGN1	YIR001C	KIN1	P13185	1064 aa		5	□□□□□ -1.61
SGN1	YIR001C	OSM1	P21375	501 aa	Known RBP	5	□□□□□ -1.61
SGN1	YIR001C	SLY41	P22215	453 aa		5	□□□□□ -1.61
SGN1	YIR001C	MET22	P32179	357 aa		5	□□□□□ -1.61
SGN1	YIR001C	TUB4	P53378	473 aa		5	□□□□□ -1.61
SGN1	YIR001C	AGE1	Q04412	482 aa		5	□□□□□ -1.61
SGN1	YIR001C	KXD1	P53158	218 aa		4.99	□□□□□ -1.61
SGN1	YIR001C	YBP2	P53169	641 aa		4.99	□□□□□ -1.61
SGN1	YIR001C	PUS6	P53294	404 aa		4.99	□□□□□ -1.61
SGN1	YIR001C	PUS5	Q06244	254 aa		4.99	□□□□□ -1.61
SGN1	YIR001C	MHP1	P43638	1398 aa		4.99	□□□□□ -1.61
SGN1	YIR001C	TPD3	P31383	635 aa		4.98	□□□□□ -1.61
SGN1	YIR001C	ERT1	P38140	529 aa		4.98	□□□□□ -1.61
SGN1	YIR001C	PAC1	P39946	494 aa	Known RBP	4.98	□□□□□ -1.61
SGN1	YIR001C	AIR1	P40507	360 aa	Known RBP	4.98	□□□□□ -1.61
SGN1	YIR001C	CSN12	P47130	423 aa		4.98	□□□□□ -1.61
SGN1	YIR001C	KIN4	Q01919	800 aa		4.98	□□□□□ -1.61
SGN1	YIR001C	TBF1	Q02457	562 aa		4.98	□□□□□ -1.61
SGN1	YIR001C	GRX4	P32642	244 aa		4.97	□□□□□ -1.61
SGN1	YIR001C	RIX7	Q07844	837 aa	Known RBP	4.97	□□□□□ -1.61
SGN1	YIR001C	CTI6	Q08923	506 aa		4.97	□□□□□ -1.61
SGN1	YIR001C	YML133C	Q03099	1374 aa		4.96	□□□□□ -1.62
SGN1	YIR001C	YLL067C	Q07888	1374 aa		4.96	□□□□□ -1.62
SGN1	YIR001C	YLL066C	Q99208	1374 aa		4.96	□□□□□ -1.62
SGN1	YIR001C	MOD5	P07884	428 aa		4.96	□□□□□ -1.62
SGN1	YIR001C	RPA14	P50106	137 aa		4.96	□□□□□ -1.62
SGN1	YIR001C	INP54	Q08227	384 aa	Known RBP	4.96	□□□□□ -1.62
SGN1	YIR001C	TOP1	P04786	769 aa		4.95	□□□□□ -1.62
SGN1	YIR001C	CST6	P40535	587 aa		4.95	□□□□□ -1.62
SGN1	YIR001C	BDP1	P46678	594 aa		4.95	□□□□□ -1.62
SGN1	YIR001C	ALR1	Q08269	859 aa		4.95	□□□□□ -1.62
SGN1	YIR001C	NYV1	Q12255	253 aa		4.95	□□□□□ -1.62
SGN1	YIR001C	SEC3	P33332	1336 aa	Known RBP	4.95	□□□□□ -1.62
SGN1	YIR001C	TRM1	P15565	570 aa	Known RBP	4.94	□□□□□ -1.62
SGN1	YIR001C	HXT10	P43581	546 aa		4.94	□□□□□ -1.62
SGN1	YIR001C	HED1	Q03937	162 aa		4.94	□□□□□ -1.62
SGN1	YIR001C	TAP42	Q04372	366 aa		4.94	□□□□□ -1.62
SGN1	YIR001C	YPR097W	Q06839	1073 aa		4.94	□□□□□ -1.62
SGN1	YIR001C	LPD1	P09624	499 aa	Known RBP	4.93	□□□□□ -1.62
SGN1	YIR001C	ESS1	P22696	170 aa		4.93	□□□□□ -1.62
SGN1	YIR001C	SCJ1	P25303	377 aa		4.93	□□□□□ -1.62
SGN1	YIR001C	HSP104	P31539	908 aa	Known RBP	4.93	□□□□□ -1.62
SGN1	YIR001C	PFF1	P38244	976 aa		4.93	□□□□□ -1.62
SGN1	YIR001C	LEO1	P38439	464 aa		4.93	□□□□□ -1.62
SGN1	YIR001C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
SGN1	YIR001C	HIM1	Q06674	414 aa		4.93	□□□□□ -1.62
SGN1	YIR001C	UTP10	P42945	1769 aa	Known RBP	4.93	□□□□□ -1.62
SGN1	YIR001C	PMD1	P32634	1753 aa		4.92	□□□□□ -1.62
SGN1	YIR001C	THS1	P04801	734 aa	Known RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	RPS9B	P05755	195 aa	Known RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	PDC1	P06169	563 aa	Known RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	RET1	P22276	1149 aa	Known RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	SER1	P33330	395 aa	Known RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	PKH3	Q03306	898 aa	Predicted RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	TYW1	Q08960	810 aa	Known RBP	4.92	□□□□□ -1.62
SGN1	YIR001C	YDL206W	Q12424	762 aa		4.92	□□□□□ -1.62
SGN1	YIR001C	CDC4	P07834	779 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	KTR1	P27810	393 aa	Known RBP	4.91	□□□□□ -1.62
SGN1	YIR001C	ICL1	P28240	557 aa	Predicted RBP	4.91	□□□□□ -1.62
SGN1	YIR001C	SMY1	P32364	656 aa	Known RBP	4.91	□□□□□ -1.62
SGN1	YIR001C	RSC30	P38781	883 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	CTF4	Q01454	927 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	IRC3	Q06683	689 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	ATG20	Q07528	640 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	YDL176W	Q12027	708 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	NUP145	P49687	1317 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	AUS1	Q08409	1394 aa		4.91	□□□□□ -1.62
SGN1	YIR001C	KAR2	P16474	682 aa	Known RBP	4.9	□□□□□ -1.63
SGN1	YIR001C	YKU70	P32807	602 aa		4.9	□□□□□ -1.63
SGN1	YIR001C	DSD1	P53095	428 aa		4.9	□□□□□ -1.63
SGN1	YIR001C	DUS1	P53759	423 aa	Known RBP	4.9	□□□□□ -1.63
SGN1	YIR001C	MDG1	P53885	366 aa		4.9	□□□□□ -1.63
SGN1	YIR001C	RMT2	Q03305	412 aa		4.9	□□□□□ -1.63
SGN1	YIR001C	ARG8	P18544	423 aa		4.89	□□□□□ -1.63
SGN1	YIR001C	YJU3	P28321	313 aa		4.89	□□□□□ -1.63
SGN1	YIR001C	SHC1	P39000	512 aa		4.89	□□□□□ -1.63
SGN1	YIR001C	YFR016C	P43597	1233 aa	Known RBP	4.89	□□□□□ -1.63
SGN1	YIR001C	HGH1	P48362	394 aa	Known RBP	4.89	□□□□□ -1.63
SGN1	YIR001C	CLA4	P48562	842 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms