RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 XRN1Q8IZH2 1706 aaKnown RBP24.08■■□□□ 1.45
PHGDH-232ENST00000641947 FAM135BQ49AJ0 1406 aa24.08■■□□□ 1.45
PHGDH-232ENST00000641947 ROBO2Q9HCK4 1378 aa24.08■■□□□ 1.45
PHGDH-232ENST00000641947 CABP2Q9NPB3 220 aa24.08■■□□□ 1.44
PHGDH-232ENST00000641947 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.08■■□□□ 1.44
PHGDH-232ENST00000641947 KTN1Q86UP2 1357 aaKnown RBP24.06■■□□□ 1.44
PHGDH-232ENST00000641947 PUS7Q96PZ0 661 aaKnown RBP24.06■■□□□ 1.44
PHGDH-232ENST00000641947 SLC12A5Q9H2X9 1139 aa24.05■■□□□ 1.44
PHGDH-232ENST00000641947 TBX22Q9Y458 520 aa24.05■■□□□ 1.44
PHGDH-232ENST00000641947 CARD14Q9BXL6 1004 aa24.04■■□□□ 1.44
PHGDH-232ENST00000641947 AMER1Q5JTC6 1135 aaPredicted RBP24.03■■□□□ 1.44
PHGDH-232ENST00000641947 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
PHGDH-232ENST00000641947 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
PHGDH-232ENST00000641947 SIRT1Q96EB6 747 aa24.03■■□□□ 1.44
PHGDH-232ENST00000641947 RALBP1Q15311 655 aa24.01■■□□□ 1.43
PHGDH-232ENST00000641947 TMC1Q8TDI8 760 aa24.01■■□□□ 1.43
PHGDH-232ENST00000641947 ADGRB2O60241 1585 aa24.01■■□□□ 1.43
PHGDH-232ENST00000641947 ANKLE2Q86XL3 938 aa24.01■■□□□ 1.43
PHGDH-232ENST00000641947 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
PHGDH-232ENST00000641947 USP32Q8NFA0 1604 aa24■■□□□ 1.43
PHGDH-232ENST00000641947 SRPK2P78362 688 aaKnown RBP24■■□□□ 1.43
PHGDH-232ENST00000641947 CDK19Q9BWU1 502 aa24■■□□□ 1.43
PHGDH-232ENST00000641947 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
PHGDH-232ENST00000641947 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
PHGDH-232ENST00000641947 PTCH1Q13635 1447 aa23.99■■□□□ 1.43
PHGDH-232ENST00000641947 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
PHGDH-232ENST00000641947 CD163L1Q9NR16 1453 aa23.98■■□□□ 1.43
PHGDH-232ENST00000641947 NSD3Q9BZ95 1437 aa23.97■■□□□ 1.43
PHGDH-232ENST00000641947 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
PHGDH-232ENST00000641947 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
PHGDH-232ENST00000641947 NPC1L1Q9UHC9 1359 aa23.97■■□□□ 1.43
PHGDH-232ENST00000641947 ANKRD36BQ8N2N9 1353 aa23.96■■□□□ 1.43
PHGDH-232ENST00000641947 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
PHGDH-232ENST00000641947 NPHP4O75161 1426 aaPredicted RBP23.94■■□□□ 1.42
PHGDH-232ENST00000641947 NINLQ9Y2I6 1382 aa23.94■■□□□ 1.42
PHGDH-232ENST00000641947 A0A1W2PP64 1363 aa23.93■■□□□ 1.42
PHGDH-232ENST00000641947 PIK3R4Q99570 1358 aa23.93■■□□□ 1.42
PHGDH-232ENST00000641947 WASLO00401 505 aaPredicted RBP23.93■■□□□ 1.42
PHGDH-232ENST00000641947 TOPAZ1Q8N9V7 1692 aa23.92■■□□□ 1.42
PHGDH-232ENST00000641947 BRD4O60885 1362 aaPredicted RBP23.92■■□□□ 1.42
PHGDH-232ENST00000641947 NCKAP5LQ9HCH0 1330 aa23.91■■□□□ 1.42
PHGDH-232ENST00000641947 ATP7BP35670 1465 aa23.9■■□□□ 1.42
PHGDH-232ENST00000641947 KCNA6P17658 529 aa23.89■■□□□ 1.42
PHGDH-232ENST00000641947 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
PHGDH-232ENST00000641947 NLRP13Q86W25 1043 aa23.88■■□□□ 1.41
PHGDH-232ENST00000641947 FAM9BQ8IZU0 186 aa23.88■■□□□ 1.41
PHGDH-232ENST00000641947 AKAP12Q02952 1782 aa23.88■■□□□ 1.41
PHGDH-232ENST00000641947 NALCNQ8IZF0 1738 aa23.88■■□□□ 1.41
PHGDH-232ENST00000641947 ANKRD26Q9UPS8 1709 aa23.88■■□□□ 1.41
PHGDH-232ENST00000641947 CABP1Q9NZU7 370 aa23.87■■□□□ 1.41
PHGDH-232ENST00000641947 PRR36Q9H6K5 1346 aa23.87■■□□□ 1.41
PHGDH-232ENST00000641947 KIF20BQ96Q89 1820 aa23.87■■□□□ 1.41
PHGDH-232ENST00000641947 ITSN1Q15811 1721 aa23.87■■□□□ 1.41
PHGDH-232ENST00000641947 MON2Q7Z3U7 1717 aa23.85■■□□□ 1.41
PHGDH-232ENST00000641947 PPIP5K1Q6PFW1 1433 aa23.85■■□□□ 1.41
PHGDH-232ENST00000641947 PNISRQ8TF01 805 aaKnown RBP23.85■■□□□ 1.41
PHGDH-232ENST00000641947 CDC42BPGQ6DT37 1551 aa23.85■■□□□ 1.41
PHGDH-232ENST00000641947 NWD1Q149M9 1564 aa23.84■■□□□ 1.41
PHGDH-232ENST00000641947 PPP2R1AP30153 589 aa23.84■■□□□ 1.41
PHGDH-232ENST00000641947 NUDT16Q96DE0 195 aaKnown RBP23.83■■□□□ 1.41
PHGDH-232ENST00000641947 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
PHGDH-232ENST00000641947 FMN2Q9NZ56 1722 aa23.82■■□□□ 1.4
PHGDH-232ENST00000641947 CPSF1Q10570 1443 aaKnown RBP23.81■■□□□ 1.4
PHGDH-232ENST00000641947 TERF2IPQ9NYB0 399 aa23.8■■□□□ 1.4
PHGDH-232ENST00000641947 CGNL1Q0VF96 1302 aa23.8■■□□□ 1.4
PHGDH-232ENST00000641947 HSPA2P54652 639 aa23.8■■□□□ 1.4
PHGDH-232ENST00000641947 STRCP1A6NGW2 1772 aa23.8■■□□□ 1.4
PHGDH-232ENST00000641947 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
PHGDH-232ENST00000641947 NKTRP30414 1462 aaKnown RBP23.79■■□□□ 1.4
PHGDH-232ENST00000641947 HNRNPUQ00839 825 aaKnown RBP eCLIP23.78■■□□□ 1.4
PHGDH-232ENST00000641947 NRKQ7Z2Y5 1582 aa23.77■■□□□ 1.4
PHGDH-232ENST00000641947 NSD2O96028 1365 aa23.77■■□□□ 1.39
PHGDH-232ENST00000641947 HDGFL2Q7Z4V5 671 aaPredicted RBP23.76■■□□□ 1.39
PHGDH-232ENST00000641947 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
PHGDH-232ENST00000641947 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
PHGDH-232ENST00000641947 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
PHGDH-232ENST00000641947 MORC1Q86VD1 984 aa23.73■■□□□ 1.39
PHGDH-232ENST00000641947 FYB1O15117 783 aa23.72■■□□□ 1.39
PHGDH-232ENST00000641947 SHPRHQ149N8 1683 aa23.71■■□□□ 1.39
PHGDH-232ENST00000641947 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
PHGDH-232ENST00000641947 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.39
PHGDH-232ENST00000641947 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
PHGDH-232ENST00000641947 ADGRL3Q9HAR2 1447 aa23.7■■□□□ 1.38
PHGDH-232ENST00000641947 ANKARQ7Z5J8 1434 aa23.67■■□□□ 1.38
PHGDH-232ENST00000641947 PLEKHG3A1L390 1219 aa23.67■■□□□ 1.38
PHGDH-232ENST00000641947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.67■■□□□ 1.38
PHGDH-232ENST00000641947 ACEP12821 1306 aa23.66■■□□□ 1.38
PHGDH-232ENST00000641947 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.38
PHGDH-232ENST00000641947 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.37
PHGDH-232ENST00000641947 SENP3-EIF4A1A0A087X0R7 540 aa23.63■■□□□ 1.37
PHGDH-232ENST00000641947 POLR3AO14802 1390 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-232ENST00000641947 USP6P35125 1406 aa23.63■■□□□ 1.37
PHGDH-232ENST00000641947 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
PHGDH-232ENST00000641947 XIRP1Q702N8 1843 aaKnown RBP23.62■■□□□ 1.37
PHGDH-232ENST00000641947 NME9Q86XW9 330 aa23.62■■□□□ 1.37
PHGDH-232ENST00000641947 SSH2Q76I76 1423 aa23.61■■□□□ 1.37
PHGDH-232ENST00000641947 PMFBP1Q8TBY8 1022 aa23.61■■□□□ 1.37
PHGDH-232ENST00000641947 ZRANB1Q9UGI0 708 aa23.61■■□□□ 1.37
PHGDH-232ENST00000641947 ZNF692Q9BU19 519 aaPredicted RBP23.6■■□□□ 1.37
PHGDH-232ENST00000641947 INSRP06213 1382 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms