RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
SCARB2-224ENST00000640880 CFAP70Q5T0N1 1121 aa11.27□□□□□ -0.61
SCARB2-224ENST00000640880 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-224ENST00000640880 TSC1Q92574 1164 aa11.27□□□□□ -0.61
SCARB2-224ENST00000640880 HLA-CQ95604 372 aa11.27□□□□□ -0.61
SCARB2-224ENST00000640880 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
SCARB2-224ENST00000640880 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
SCARB2-224ENST00000640880 PATL2C9JE40 543 aaKnown RBP11.25□□□□□ -0.61
SCARB2-224ENST00000640880 MTMR2Q13614 643 aa11.25□□□□□ -0.61
SCARB2-224ENST00000640880 LRRN4Q8WUT4 740 aa11.25□□□□□ -0.61
SCARB2-224ENST00000640880 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
SCARB2-224ENST00000640880 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
SCARB2-224ENST00000640880 SLC10A3P09131 477 aa11.23□□□□□ -0.61
SCARB2-224ENST00000640880 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
SCARB2-224ENST00000640880 BRD1O95696 1058 aa11.22□□□□□ -0.61
SCARB2-224ENST00000640880 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
SCARB2-224ENST00000640880 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
SCARB2-224ENST00000640880 CFAP99D6REC4 459 aa11.21□□□□□ -0.61
SCARB2-224ENST00000640880 KCNA1Q09470 495 aa11.21□□□□□ -0.61
SCARB2-224ENST00000640880 ALG2Q9H553 416 aa11.21□□□□□ -0.61
SCARB2-224ENST00000640880 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
SCARB2-224ENST00000640880 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-224ENST00000640880 C6orf229H3BNL8 230 aa11.19□□□□□ -0.62
SCARB2-224ENST00000640880 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-224ENST00000640880 EPS8L1Q8TE68 723 aa11.19□□□□□ -0.62
SCARB2-224ENST00000640880 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-224ENST00000640880 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-224ENST00000640880 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
SCARB2-224ENST00000640880 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
SCARB2-224ENST00000640880 GRIPAP1Q4V328 841 aa11.16□□□□□ -0.62
SCARB2-224ENST00000640880 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
SCARB2-224ENST00000640880 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
SCARB2-224ENST00000640880 SOX11P35716 441 aa11.15□□□□□ -0.62
SCARB2-224ENST00000640880 FUT2Q10981 343 aa11.15□□□□□ -0.62
SCARB2-224ENST00000640880 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-224ENST00000640880 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
SCARB2-224ENST00000640880 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
SCARB2-224ENST00000640880 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
SCARB2-224ENST00000640880 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
SCARB2-224ENST00000640880 SEMA3FQ13275 785 aa11.13□□□□□ -0.63
SCARB2-224ENST00000640880 NR6A1Q15406 480 aa11.13□□□□□ -0.63
SCARB2-224ENST00000640880 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
SCARB2-224ENST00000640880 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
SCARB2-224ENST00000640880 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-224ENST00000640880 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-224ENST00000640880 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
SCARB2-224ENST00000640880 CFHP08603 1231 aa11.11□□□□□ -0.63
SCARB2-224ENST00000640880 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
SCARB2-224ENST00000640880 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-224ENST00000640880 ATG7O95352 703 aa11.1□□□□□ -0.63
SCARB2-224ENST00000640880 RABGEF1Q9UJ41 708 aa11.1□□□□□ -0.63
SCARB2-224ENST00000640880 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
SCARB2-224ENST00000640880 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
SCARB2-224ENST00000640880 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
SCARB2-224ENST00000640880 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
SCARB2-224ENST00000640880 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
SCARB2-224ENST00000640880 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
SCARB2-224ENST00000640880 PSEN2P49810 448 aa11.08□□□□□ -0.64
SCARB2-224ENST00000640880 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
SCARB2-224ENST00000640880 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
SCARB2-224ENST00000640880 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
SCARB2-224ENST00000640880 TMEM88BA6NKF7 163 aa11.07□□□□□ -0.64
SCARB2-224ENST00000640880 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCARB2-224ENST00000640880 FAM98CQ17RN3 349 aaKnown RBP11.06□□□□□ -0.64
SCARB2-224ENST00000640880 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
SCARB2-224ENST00000640880 NACADO15069 1562 aa11.05□□□□□ -0.64
SCARB2-224ENST00000640880 SNPHO15079 494 aa11.05□□□□□ -0.64
SCARB2-224ENST00000640880 ATP9BO43861 1147 aa11.05□□□□□ -0.64
SCARB2-224ENST00000640880 RNF40O75150 1001 aa11.05□□□□□ -0.64
SCARB2-224ENST00000640880 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
SCARB2-224ENST00000640880 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
SCARB2-224ENST00000640880 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
SCARB2-224ENST00000640880 SND1Q7KZF4 910 aaKnown RBP eCLIP11.03□□□□□ -0.645e-6■□□□□ 9.3
SCARB2-224ENST00000640880 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
SCARB2-224ENST00000640880 SLC4A5Q9BY07 1137 aa11.02□□□□□ -0.65
SCARB2-224ENST00000640880 ST18O60284 1047 aa11.01□□□□□ -0.65
SCARB2-224ENST00000640880 NR1H3Q13133 447 aa11.01□□□□□ -0.65
SCARB2-224ENST00000640880 ARHGAP33O14559 1287 aa11□□□□□ -0.65
SCARB2-224ENST00000640880 DESI1Q6ICB0 168 aa11□□□□□ -0.65
SCARB2-224ENST00000640880 FBXO45P0C2W1 286 aa10.99□□□□□ -0.65
SCARB2-224ENST00000640880 MORN1Q5T089 497 aa10.99□□□□□ -0.65
SCARB2-224ENST00000640880 DMRTA1Q5VZB9 504 aa10.99□□□□□ -0.65
SCARB2-224ENST00000640880 B4GALNT3Q6L9W6 998 aa10.99□□□□□ -0.65
SCARB2-224ENST00000640880 Q3C1V9 767 aa10.98□□□□□ -0.65
SCARB2-224ENST00000640880 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
SCARB2-224ENST00000640880 LYPD8Q6UX82 237 aa10.98□□□□□ -0.65
SCARB2-224ENST00000640880 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
SCARB2-224ENST00000640880 PIK3CDO00329 1044 aa10.97□□□□□ -0.65
SCARB2-224ENST00000640880 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-224ENST00000640880 MYO15BQ96JP2 1530 aa10.97□□□□□ -0.65
SCARB2-224ENST00000640880 ZBBXA8MT70 800 aa10.96□□□□□ -0.65
SCARB2-224ENST00000640880 E9PSI1 815 aa10.96□□□□□ -0.65
SCARB2-224ENST00000640880 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
SCARB2-224ENST00000640880 LAPTM4BQ86VI4 370 aa10.96□□□□□ -0.65
SCARB2-224ENST00000640880 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
SCARB2-224ENST00000640880 AXIN2Q9Y2T1 843 aa10.96□□□□□ -0.65
SCARB2-224ENST00000640880 DCAF1Q9Y4B6 1507 aa10.95□□□□□ -0.66
SCARB2-224ENST00000640880 ELOAQ14241 798 aaKnown RBP10.95□□□□□ -0.66
SCARB2-224ENST00000640880 TMEM164Q5U3C3 297 aa10.95□□□□□ -0.66
SCARB2-224ENST00000640880 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms