RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 MYOM2P54296 1465 aa17.54■□□□□ 0.4
PAX6-280ENST00000640872 IQSEC2Q5JU85 1478 aa17.54■□□□□ 0.4
PAX6-280ENST00000640872 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
PAX6-280ENST00000640872 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
PAX6-280ENST00000640872 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
PAX6-280ENST00000640872 SLKQ9H2G2 1235 aaPredicted RBP17.53■□□□□ 0.4
PAX6-280ENST00000640872 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
PAX6-280ENST00000640872 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
PAX6-280ENST00000640872 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
PAX6-280ENST00000640872 PCDHB15Q9Y5E8 787 aa17.51■□□□□ 0.39
PAX6-280ENST00000640872 KIDINS220Q9ULH0 1771 aa17.51■□□□□ 0.39
PAX6-280ENST00000640872 UGGT1Q9NYU2 1555 aa17.51■□□□□ 0.39
PAX6-280ENST00000640872 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
PAX6-280ENST00000640872 RSPH6AQ9H0K4 717 aa17.51■□□□□ 0.39
PAX6-280ENST00000640872 MROH1Q8NDA8 1641 aa17.51■□□□□ 0.39
PAX6-280ENST00000640872 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
PAX6-280ENST00000640872 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
PAX6-280ENST00000640872 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
PAX6-280ENST00000640872 RLBP1P12271 317 aa17.5■□□□□ 0.39
PAX6-280ENST00000640872 KANK1Q14678 1352 aa17.49■□□□□ 0.39
PAX6-280ENST00000640872 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
PAX6-280ENST00000640872 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
PAX6-280ENST00000640872 L1TD1Q5T7N2 865 aaKnown RBP17.48■□□□□ 0.39
PAX6-280ENST00000640872 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
PAX6-280ENST00000640872 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
PAX6-280ENST00000640872 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
PAX6-280ENST00000640872 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
PAX6-280ENST00000640872 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
PAX6-280ENST00000640872 ZNF518AQ6AHZ1 1483 aa17.47■□□□□ 0.39
PAX6-280ENST00000640872 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
PAX6-280ENST00000640872 NRXN1Q9ULB1 1477 aa17.46■□□□□ 0.39
PAX6-280ENST00000640872 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
PAX6-280ENST00000640872 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.38
PAX6-280ENST00000640872 EIF5BO60841 1220 aaKnown RBP17.45■□□□□ 0.38
PAX6-280ENST00000640872 GGT6Q6P531 493 aa17.45■□□□□ 0.38
PAX6-280ENST00000640872 TCP11L2Q8N4U5 519 aa17.45■□□□□ 0.38
PAX6-280ENST00000640872 UBE2Q2Q8WVN8 375 aa17.45■□□□□ 0.38
PAX6-280ENST00000640872 RRP7AQ9Y3A4 280 aaKnown RBP17.45■□□□□ 0.38
PAX6-280ENST00000640872 KIF1BO60333 1816 aa17.44■□□□□ 0.38
PAX6-280ENST00000640872 POGZQ7Z3K3 1410 aa17.44■□□□□ 0.38
PAX6-280ENST00000640872 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
PAX6-280ENST00000640872 RRAGDQ9NQL2 400 aaPredicted RBP17.44■□□□□ 0.38
PAX6-280ENST00000640872 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
PAX6-280ENST00000640872 MROH2AA6NES4 1674 aa17.43■□□□□ 0.38
PAX6-280ENST00000640872 ZC3H13Q5T200 1668 aaKnown RBP17.43■□□□□ 0.38
PAX6-280ENST00000640872 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
PAX6-280ENST00000640872 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
PAX6-280ENST00000640872 MORC1Q86VD1 984 aa17.43■□□□□ 0.38
PAX6-280ENST00000640872 SETBP1Q9Y6X0 1596 aa17.42■□□□□ 0.38
PAX6-280ENST00000640872 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
PAX6-280ENST00000640872 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
PAX6-280ENST00000640872 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
PAX6-280ENST00000640872 PPRC1Q5VV67 1664 aaKnown RBP17.4■□□□□ 0.38
PAX6-280ENST00000640872 MVPQ14764 893 aaKnown RBP17.39■□□□□ 0.38
PAX6-280ENST00000640872 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.38
PAX6-280ENST00000640872 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
PAX6-280ENST00000640872 CFAP65Q6ZU64 1925 aaKnown RBP17.39■□□□□ 0.37
PAX6-280ENST00000640872 MCM4P33991 863 aa17.39■□□□□ 0.37
PAX6-280ENST00000640872 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
PAX6-280ENST00000640872 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
PAX6-280ENST00000640872 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
PAX6-280ENST00000640872 XRCC6P12956 609 aaKnown RBP eCLIP17.38■□□□□ 0.37
PAX6-280ENST00000640872 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
PAX6-280ENST00000640872 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
PAX6-280ENST00000640872 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
PAX6-280ENST00000640872 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
PAX6-280ENST00000640872 NPATQ14207 1427 aa17.36■□□□□ 0.37
PAX6-280ENST00000640872 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
PAX6-280ENST00000640872 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
PAX6-280ENST00000640872 MTHFSP49914 203 aa17.35■□□□□ 0.37
PAX6-280ENST00000640872 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
PAX6-280ENST00000640872 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
PAX6-280ENST00000640872 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
PAX6-280ENST00000640872 NOS1P29475 1434 aa17.34■□□□□ 0.37
PAX6-280ENST00000640872 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
PAX6-280ENST00000640872 ADGRB1O14514 1584 aa17.34■□□□□ 0.37
PAX6-280ENST00000640872 DZIP1LQ8IYY4 767 aaKnown RBP17.33■□□□□ 0.37
PAX6-280ENST00000640872 SPRYD3Q8NCJ5 442 aa17.33■□□□□ 0.37
PAX6-280ENST00000640872 GLI2P10070 1586 aa17.33■□□□□ 0.37
PAX6-280ENST00000640872 CFAP53Q96M91 514 aa17.33■□□□□ 0.36
PAX6-280ENST00000640872 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
PAX6-280ENST00000640872 LMTK2Q8IWU2 1503 aa17.32■□□□□ 0.36
PAX6-280ENST00000640872 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
PAX6-280ENST00000640872 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
PAX6-280ENST00000640872 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
PAX6-280ENST00000640872 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
PAX6-280ENST00000640872 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
PAX6-280ENST00000640872 PPLO60437 1756 aa17.31■□□□□ 0.36
PAX6-280ENST00000640872 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
PAX6-280ENST00000640872 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
PAX6-280ENST00000640872 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
PAX6-280ENST00000640872 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
PAX6-280ENST00000640872 TRAK2O60296 914 aa17.3■□□□□ 0.36
PAX6-280ENST00000640872 NEO1Q92859 1461 aa17.3■□□□□ 0.36
PAX6-280ENST00000640872 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
PAX6-280ENST00000640872 ARXQ96QS3 562 aa17.29■□□□□ 0.36
PAX6-280ENST00000640872 GZF1Q9H116 711 aaPredicted RBP17.29■□□□□ 0.36
PAX6-280ENST00000640872 NSD2O96028 1365 aa17.29■□□□□ 0.36
PAX6-280ENST00000640872 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
PAX6-280ENST00000640872 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms