RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, human

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-222	ENST00000640769	HSPA5	P11021	654 aa	Known RBP	10.34	□□□□□ -0.75
RTTN-222	ENST00000640769	ERLIN1	O75477	346 aa		10.33	□□□□□ -0.76
RTTN-222	ENST00000640769	NUCB2	P80303	420 aa		10.33	□□□□□ -0.76
RTTN-222	ENST00000640769	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.33	□□□□□ -0.76
RTTN-222	ENST00000640769	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
RTTN-222	ENST00000640769	CEBPZ	Q03701	1054 aa	Known RBP	10.33	□□□□□ -0.76
RTTN-222	ENST00000640769	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.33	□□□□□ -0.76
RTTN-222	ENST00000640769	CCDC160	A6NGH7	325 aa		10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	PRPF40A	O75400	957 aa	Known RBP	10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	RABEP1	Q15276	862 aa		10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	SYCP1	Q15431	976 aa		10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	RRP7A	Q9Y3A4	280 aa	Known RBP	10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	MNAT1	P51948	309 aa		10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	CPLX2	Q6PUV4	134 aa	Known RBP	10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	DDX23	Q9BUQ8	820 aa	Known RBP	10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	SERPINC1	P01008	464 aa		10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	STK26	Q9P289	416 aa		10.32	□□□□□ -0.76
RTTN-222	ENST00000640769	UBE4A	Q14139	1066 aa		10.31	□□□□□ -0.76
RTTN-222	ENST00000640769	FILIP1L	Q4L180	1135 aa		10.31	□□□□□ -0.76
RTTN-222	ENST00000640769	LETM1	O95202	739 aa	Predicted RBP	10.31	□□□□□ -0.76
RTTN-222	ENST00000640769	ZKSCAN1	P17029	563 aa	Predicted RBP	10.31	□□□□□ -0.76
RTTN-222	ENST00000640769	REC8	O95072	547 aa		10.31	□□□□□ -0.76
RTTN-222	ENST00000640769	CFAP57	Q96MR6	1250 aa		10.31	□□□□□ -0.76
RTTN-222	ENST00000640769	TMCO5B	A8MYB1	307 aa		10.3	□□□□□ -0.76
RTTN-222	ENST00000640769	CCDC91	Q7Z6B0	441 aa		10.3	□□□□□ -0.76
RTTN-222	ENST00000640769	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.3	□□□□□ -0.76
RTTN-222	ENST00000640769	CHMP4C	Q96CF2	233 aa		10.3	□□□□□ -0.76
RTTN-222	ENST00000640769	ARID4A	P29374	1257 aa	Predicted RBP	10.3	□□□□□ -0.76
RTTN-222	ENST00000640769	MTMR7	Q9Y216	660 aa		10.3	□□□□□ -0.76
RTTN-222	ENST00000640769	VGF	O15240	615 aa	Predicted RBP	10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	DAAM2	Q86T65	1068 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	MYO15B	Q96JP2	1530 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	MICALCL	Q6ZW33	695 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	CSB-PGBD3	P0DP91	1061 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	PPP4R3B	Q5MIZ7	849 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	TMX1	Q9H3N1	280 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	FYB1	O15117	783 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	PPM1E	Q8WY54	764 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	ERICH2	A1L162	156 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	C22orf23	Q9BZE7	217 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	GRPEL1	Q9HAV7	217 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	GOPC	Q9HD26	462 aa		10.29	□□□□□ -0.76
RTTN-222	ENST00000640769	SAFB	Q15424	915 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	DNAAF4	Q8WXU2	420 aa		10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	KIN	O60870	393 aa	Known RBP	10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	TMEM132A	Q24JP5	1023 aa		10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	RUFY2	Q8WXA3	655 aa		10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	PPFIBP1	Q86W92	1011 aa		10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	RRP1	P56182	461 aa	Known RBP	10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	TMCO4	Q5TGY1	634 aa		10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	COG6	Q9Y2V7	657 aa		10.28	□□□□□ -0.76
RTTN-222	ENST00000640769	ELL2	O00472	640 aa	Predicted RBP	10.27	□□□□□ -0.76
RTTN-222	ENST00000640769	AMOTL1	Q8IY63	956 aa		10.27	□□□□□ -0.76
RTTN-222	ENST00000640769	EEA1	Q15075	1411 aa		10.27	□□□□□ -0.76
RTTN-222	ENST00000640769	STAMBP	O95630	424 aa		10.27	□□□□□ -0.76
RTTN-222	ENST00000640769	SOGA3	Q5TF21	947 aa		10.27	□□□□□ -0.76
RTTN-222	ENST00000640769	CRACR2A	Q9BSW2	395 aa		10.27	□□□□□ -0.76
RTTN-222	ENST00000640769	TRDN	Q13061	729 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	RNF20	Q5VTR2	975 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	BMS1	Q14692	1282 aa	Known RBP	10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	NGEF	Q8N5V2	710 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	CLIP1	P30622	1438 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	CCDC175	P0C221	793 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	NOL10	Q9BSC4	688 aa	Known RBP	10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	TDO2	P48775	406 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	TIGD1	Q96MW7	591 aa		10.27	□□□□□ -0.77
RTTN-222	ENST00000640769	SEPT6	Q14141	434 aa		10.26	□□□□□ -0.77
RTTN-222	ENST00000640769	ATP2C2	O75185	946 aa		10.26	□□□□□ -0.77
RTTN-222	ENST00000640769	IQCE	Q6IPM2	695 aa		10.26	□□□□□ -0.77
RTTN-222	ENST00000640769	FIBP	O43427	364 aa		10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	GTF2E1	P29083	439 aa	Predicted RBP	10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	ATP2B1	P20020	1258 aa		10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	CASQ1	P31415	396 aa		10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	NECTIN2	Q92692	538 aa		10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	SMC1A	Q14683	1233 aa	Known RBP	10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	TANGO6	Q9C0B7	1094 aa		10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	KIAA1328	Q86T90	577 aa		10.25	□□□□□ -0.77
RTTN-222	ENST00000640769	LMAN1	P49257	510 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	NAP1L3	Q99457	506 aa	Predicted RBP	10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	ROCK2	O75116	1388 aa	Known RBP	10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	FLII	Q13045	1269 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	INTS3	Q68E01	1043 aa	Known RBP	10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	FAM184B	Q9ULE4	1060 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	FOXD1	Q16676	465 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	UBXN4	Q92575	508 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	WDR66	Q8TBY9	1149 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	PDCL3	Q9H2J4	239 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	HDAC5	Q9UQL6	1122 aa		10.24	□□□□□ -0.77
RTTN-222	ENST00000640769	ZWINT	O95229	277 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	BRMS1	Q9HCU9	246 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	CPSF2	Q9P2I0	782 aa	Known RBP	10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	ESPN	B1AK53	854 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	IFIT2	P09913	472 aa	Known RBP	10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	SSR1	P43307	286 aa	Known RBP	10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	CDK5RAP3	Q96JB5	506 aa		10.23	□□□□□ -0.77
RTTN-222	ENST00000640769	TNMD	Q9H2S6	317 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms